Detailed information of deep learning profile BP000759.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000759.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000FAI
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.12 -0.00 -0.00 -0.00 0.13 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.11 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.10 0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.12 0.00 -0.00 -0.00 0.14 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 917 990 1055 977 921 883 885 941 867 940 958 931 974 961 876 1033 989 1123 1028 751 841 1786 2 5 3666 189 1 13 3699 47 792 921 774 734 831 888 829 872 880 907 866 882 936 969 1001 916 907 902 937 943 ]
C [ 1005 919 895 927 834 846 900 945 949 891 912 855 799 807 991 901 984 810 711 848 711 748 10 11 11 33 3 3677 0 1301 1486 1019 1070 1011 997 991 934 970 967 990 989 881 869 913 858 1033 927 971 917 905 ]
G [ 888 889 932 929 986 976 1025 931 924 985 983 1012 1003 958 978 930 910 1032 1189 1330 1314 1076 4 3638 2 3419 0 7 1 551 602 948 844 994 897 906 971 989 972 883 932 986 1003 968 895 882 891 934 845 914 ]
T [ 891 903 819 868 960 996 891 884 961 885 848 903 925 975 856 837 818 736 773 772 835 91 3685 47 22 60 3697 4 1 1802 821 813 1013 962 976 916 967 870 882 921 914 952 893 851 947 870 976 894 1002 939 ]

Hypothetical CWM

   
A [ 0.01 0.01 -0.01 0.01 0.07 -0.07 -0.05 0.12 -0.02 -0.03 0.01 0.13 -0.04 0.01 0.02 0.01 0.00 ]
C [ 0.02 0.02 0.03 0.00 -0.01 0.02 -0.04 -0.03 0.06 -0.05 0.11 -0.07 0.04 0.03 0.02 0.02 0.02 ]
G [ 0.02 0.02 0.02 0.04 0.04 -0.07 0.10 -0.06 0.05 -0.05 -0.04 0.02 -0.00 0.00 0.02 0.02 0.02 ]
T [ 0.00 0.01 0.02 0.01 -0.04 0.12 0.03 -0.03 -0.03 0.14 -0.05 -0.07 0.06 0.01 -0.00 0.01 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 7393

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 474

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 143

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 138

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 117

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 24

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000754.1 FOS ENCSR000DOO MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000757.1 FOS ENCSR000EVU endothelial cell of umbilical vein Homo sapiens MA1141.2
BP000758.1 FOS ENCSR000EZE HeLa-S3 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
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