Detailed information of deep learning profile BP000754.1

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This page shows detailed deep learning-derived predictions and motifs for FOS in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOS
Model ID: BP000754.1
Cell line/tissue: MCF 10A
Class: Basic leucine zipper factors (bZIP)
Family: Fos-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P01100  
Source: ENCSR000DOO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.11 -0.00 -0.00 0.00 0.14 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00 0.14 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 -0.00 0.13 -0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.13 0.00 -0.00 -0.00 0.14 0.00 -0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 3317 3365 3298 3436 3417 4077 4021 3925 3468 3235 3388 3478 3330 3486 3651 3181 3944 3322 3224 4180 3591 4626 3569 3132 3443 5656 74 10 12091 1964 40 39 12701 618 3303 3482 3154 3144 3089 3182 3244 3330 3334 3477 3162 3359 3506 3523 3642 3409 ]
C [ 3403 2692 3279 3277 3302 2658 2688 2682 2555 2631 2543 3223 2613 2601 2480 2429 2462 2706 2826 2530 3337 2444 2333 2546 2429 2622 122 11 132 137 30 12712 13 4455 4004 2909 3122 2831 3274 3540 2973 2757 2803 3319 3217 2758 2695 2904 2716 2925 ]
G [ 2668 2678 2694 2708 2705 2701 2747 2866 3389 2815 3506 2787 2851 3446 3407 3512 2977 2677 3016 2920 2803 2892 3724 4085 3630 3510 62 12714 30 10229 21 6 46 2190 2065 3216 2673 3188 2770 2646 2863 3295 3199 2787 2734 2967 3086 2851 2611 2703 ]
T [ 3386 4039 3503 3353 3350 3338 3318 3301 3362 4093 3337 3286 3980 3241 3236 3652 3391 4069 3708 3144 3043 2812 3148 3011 3272 986 12516 39 521 444 12683 17 14 5511 3402 3167 3825 3611 3641 3406 3694 3392 3438 3191 3661 3690 3487 3496 3805 3737 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.05 -0.08 -0.06 0.12 -0.01 -0.02 0.07 0.14 -0.05 0.01 0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.00 -0.00 -0.00 -0.09 0.01 0.08 -0.04 0.14 -0.07 0.04 0.04 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.04 0.04 -0.06 0.13 -0.06 0.07 -0.02 -0.09 0.00 -0.00 0.00 0.01 0.01 0.01 ]
T [ -0.01 -0.01 0.00 0.01 -0.05 0.13 0.06 -0.01 -0.01 0.14 -0.06 -0.08 0.06 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5349

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3627

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2350

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1922

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 1105

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 639

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 503

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 446

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 255

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 187

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 170

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 166

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 110

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 80

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 42

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_25

Num. of seqlets: 25

CWM

PFM

     

HCWM

9 profiles found for the same TF (FOS) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000753.1 FOS ENCSR000DON MCF 10A Homo sapiens MA1141.2
BP000755.1 FOS ENCSR000DOP MCF 10A Homo sapiens MA1141.2
BP000756.1 FOS ENCSR000DOT MCF 10A Homo sapiens MA1141.2
BP000757.1 FOS ENCSR000EVU endothelial cell of umbilical vein Homo sapiens MA1141.2
BP000758.1 FOS ENCSR000EZE HeLa-S3 Homo sapiens MA1141.2
BP000759.1 FOS ENCSR000FAI K562 Homo sapiens MA1141.2
BP000760.1 FOS ENCSR124AIG IMR-90 Homo sapiens MA1141.2
BP000761.1 FOS ENCSR569XNP MCF-7 Homo sapiens MA1141.2
BP000762.1 FOS ENCSR572DUR WTC11 Homo sapiens MA1134.2
Showing 9 profiles of page 1 from 1 pages
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