Detailed information of deep learning profile BP000744.1

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This page shows detailed deep learning-derived predictions and motifs for ZEB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZEB1
Model ID: BP000744.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: MA0103.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36197  
Source: ENCSR000BVN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 -0.00 0.03 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.01 0.00 0.03 0.03 0.00 0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.02 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1539 1644 1606 1555 1511 1555 1486 1649 1525 1548 1449 1583 1466 1534 1438 1351 1501 1511 1615 1824 980 1612 74 7374 1 1 8 82 1030 1635 1419 1664 1648 1582 1440 1647 1547 1450 1681 1562 1582 1646 1502 1554 1545 1499 1658 1573 1578 1627 ]
C [ 2305 2174 2167 2241 2167 2252 2311 2121 2265 2141 2298 2174 2148 2293 2218 2435 2424 2141 2195 2141 3240 1615 4597 39 7448 7448 23 27 1763 2224 2516 2026 2337 2187 2311 2157 1948 2227 2011 2233 2318 2193 2187 2199 2203 2212 2109 2111 2232 2197 ]
G [ 2013 2034 2018 2082 2087 1937 2011 2088 2175 2271 2072 2133 2165 1976 2123 2092 1885 2298 1984 2093 1389 1198 24 22 2 6 20 7088 2680 2401 1901 2174 2015 2268 2140 2120 2250 2184 2051 2043 1905 1994 2049 2070 2087 2125 1972 2110 2111 2030 ]
T [ 1598 1603 1664 1577 1690 1711 1647 1597 1490 1495 1636 1565 1676 1652 1676 1577 1645 1505 1661 1397 1846 3030 2760 20 4 0 7404 258 1982 1195 1619 1591 1455 1418 1564 1531 1710 1594 1712 1617 1650 1622 1717 1632 1620 1619 1716 1661 1534 1601 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 -0.01 0.03 -0.01 -0.02 -0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.01 -0.01 0.03 0.03 -0.01 -0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.00 0.00 -0.01 -0.01 -0.01 0.00 -0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 0.01 0.01 -0.01 -0.01 -0.02 0.02 -0.00 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1762

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1063

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 616

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 395

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 35

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZEB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000743.1 ZEB1 ENCSR000BND GM12878 Homo sapiens MA0103.4
BP000745.1 ZEB1 ENCSR418KUS bipolar neuron Homo sapiens MA0103.4
BP000746.1 ZEB1 ENCSR909HMT HEK293 Homo sapiens MA0103.4
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