Detailed information of deep learning profile BP000745.1

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This page shows detailed deep learning-derived predictions and motifs for ZEB1 in bipolar neuron using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZEB1
Model ID: BP000745.1
Cell line/tissue: bipolar neuron
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: MA0103.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36197  
Source: ENCSR418KUS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.04 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.05 0.00 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.02 0.02 0.00 0.00 0.00 0.01 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.01 0.00 0.00 0.02 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.03 0.00 0.02 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 14 29 21 20 12 22 22 20 17 12 15 26 22 16 14 14 6 103 0 4 0 9 12 19 26 22 18 1 103 0 8 0 14 23 18 22 15 19 20 27 16 29 24 18 20 20 25 20 24 23 ]
C [ 27 27 30 22 35 20 32 30 25 28 37 19 27 37 31 43 72 0 64 74 0 2 22 42 29 22 36 102 0 0 4 0 0 20 32 33 26 34 30 26 28 31 24 20 28 24 25 39 36 29 ]
G [ 43 35 20 35 27 36 30 31 34 34 31 37 27 28 26 26 5 0 34 25 0 83 49 26 36 38 38 0 0 101 91 0 85 34 43 21 39 24 38 31 45 29 30 38 36 29 34 17 26 28 ]
T [ 19 12 32 26 29 25 19 22 27 29 20 21 27 22 32 20 20 0 5 0 103 9 20 16 12 21 11 0 0 2 0 103 4 26 10 27 23 26 15 19 14 14 25 27 19 30 19 27 17 23 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 -0.00 -0.01 0.04 -0.03 -0.01 -0.02 0.00 -0.01 -0.01 -0.01 -0.00 0.00 -0.01 0.05 -0.05 -0.00 -0.03 0.01 -0.00 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.00 0.00 0.02 -0.01 0.02 0.03 -0.01 -0.02 0.01 0.02 0.01 0.00 0.01 0.03 -0.01 0.01 0.02 -0.02 -0.02 0.01 0.01 0.01 0.00 ]
G [ 0.00 0.00 0.01 0.00 -0.02 -0.01 0.01 0.01 -0.01 0.02 0.01 0.00 0.01 0.01 0.01 -0.02 -0.02 0.04 0.03 -0.01 0.03 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.01 -0.00 0.01 -0.02 -0.01 -0.04 0.04 -0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.00 -0.03 -0.01 -0.04 0.05 -0.02 -0.00 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 3098

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 151

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 114

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 48

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 34

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZEB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000743.1 ZEB1 ENCSR000BND GM12878 Homo sapiens MA0103.4
BP000744.1 ZEB1 ENCSR000BVN HepG2 Homo sapiens MA0103.4
BP000746.1 ZEB1 ENCSR909HMT HEK293 Homo sapiens MA0103.4
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