Detailed information of deep learning profile BP000744.1

  1. Home
  2. Deep Learning Profile > BP000744.1
This page shows detailed deep learning-derived predictions and motifs for ZEB1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZEB1
Model ID: BP000744.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: MA0103.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36197  
Source: ENCSR000BVN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 0.02 0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.03 0.03 0.00 0.01 0.00 0.00 0.00 0.00 ]
T [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 1601 1534 1661 1716 1619 1620 1632 1717 1622 1650 1617 1712 1594 1710 1531 1564 1418 1455 1591 1619 1195 1982 258 7404 0 4 20 2760 3030 1846 1397 1661 1505 1645 1577 1676 1652 1676 1565 1636 1495 1490 1597 1647 1711 1690 1577 1664 1603 1598 ]
C [ 2030 2111 2110 1972 2125 2087 2070 2049 1994 1905 2043 2051 2184 2250 2120 2140 2268 2015 2174 1901 2401 2680 7088 20 6 2 22 24 1198 1389 2093 1984 2298 1885 2092 2123 1976 2165 2133 2072 2271 2175 2088 2011 1937 2087 2082 2018 2034 2013 ]
G [ 2197 2232 2111 2109 2212 2203 2199 2187 2193 2318 2233 2011 2227 1948 2157 2311 2187 2337 2026 2516 2224 1763 27 23 7448 7448 39 4597 1615 3240 2141 2195 2141 2424 2435 2218 2293 2148 2174 2298 2141 2265 2121 2311 2252 2167 2241 2167 2174 2305 ]
T [ 1627 1578 1573 1658 1499 1545 1554 1502 1646 1582 1562 1681 1450 1547 1647 1440 1582 1648 1664 1419 1635 1030 82 8 1 1 7374 74 1612 980 1824 1615 1511 1501 1351 1438 1534 1466 1583 1449 1548 1525 1649 1486 1555 1511 1555 1606 1644 1539 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 -0.00 0.02 -0.02 -0.01 -0.01 0.01 0.01 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.02 -0.00 0.00 -0.01 -0.01 -0.01 0.00 0.00 0.01 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.01 -0.01 0.03 0.03 -0.01 0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 -0.02 -0.02 -0.01 0.03 -0.01 -0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1762

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1063

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 616

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 395

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 373

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 35

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZEB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000743.1 ZEB1 ENCSR000BND GM12878 Homo sapiens MA0103.4
BP000745.1 ZEB1 ENCSR418KUS bipolar neuron Homo sapiens MA0103.4
BP000746.1 ZEB1 ENCSR909HMT HEK293 Homo sapiens MA0103.4
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)