Detailed information of deep learning profile BP000743.1

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This page shows detailed deep learning-derived predictions and motifs for ZEB1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZEB1
Model ID: BP000743.1
Cell line/tissue: GM12878
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: MA0103.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36197  
Source: ENCSR000BND
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 0.06 -0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.06 0.00 0.02 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.07 -0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 849 795 882 865 855 880 811 856 827 815 826 916 797 775 771 740 728 756 715 826 614 1178 37 4574 2 4 2 1527 1750 934 662 767 704 734 776 890 793 818 836 830 750 829 797 853 852 868 858 854 864 821 ]
C [ 1332 1448 1413 1370 1406 1435 1343 1417 1420 1380 1437 1434 1381 1620 1419 1494 1558 1371 1718 1587 1529 1570 4527 10 8 2 7 1 1027 869 1398 1452 1493 1308 1373 1402 1377 1460 1345 1349 1510 1398 1422 1397 1326 1361 1395 1358 1398 1408 ]
G [ 1573 1515 1432 1471 1522 1456 1512 1518 1464 1565 1436 1405 1623 1427 1559 1655 1485 1674 1426 1471 1545 1376 7 8 4582 4586 3 3031 936 2269 1656 1638 1505 1815 1761 1527 1674 1602 1590 1652 1522 1591 1483 1561 1564 1561 1467 1530 1479 1533 ]
T [ 839 835 866 887 810 822 927 802 882 833 894 838 792 771 844 704 822 792 734 709 905 469 22 1 1 1 4581 34 880 521 877 736 891 736 683 774 749 713 822 762 811 775 891 782 851 803 873 851 852 831 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.01 0.00 -0.01 0.06 -0.04 -0.05 -0.03 0.02 0.00 -0.00 -0.01 -0.01 ]
C [ 0.01 0.01 0.01 0.00 0.03 -0.01 0.02 0.01 -0.02 -0.03 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.02 -0.02 0.05 0.06 -0.03 0.03 -0.00 0.01 0.01 0.00 ]
T [ -0.01 -0.01 -0.01 -0.01 -0.01 -0.04 -0.05 -0.03 0.07 -0.01 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 77

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 64

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 64

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 61

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 26

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZEB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000744.1 ZEB1 ENCSR000BVN HepG2 Homo sapiens MA0103.4
BP000745.1 ZEB1 ENCSR418KUS bipolar neuron Homo sapiens MA0103.4
BP000746.1 ZEB1 ENCSR909HMT HEK293 Homo sapiens MA0103.4
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