Detailed information of deep learning profile BP000743.1

  1. Home
  2. Deep Learning Profile > BP000743.1
This page shows detailed deep learning-derived predictions and motifs for ZEB1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ZEB1
Model ID: BP000743.1
Cell line/tissue: GM12878
Class: Homeo domain factors
Family: HD-ZF factors
JASPAR ID: MA0103.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P36197  
Source: ENCSR000BND
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.07 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.02 0.00 0.06 0.05 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.01 -0.00 0.00 -0.00 0.06 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 831 852 851 873 803 851 782 891 775 811 762 822 713 749 774 683 736 891 736 877 521 880 34 4581 1 1 1 22 469 905 709 734 792 822 704 844 771 792 838 894 833 882 802 927 822 810 887 866 835 839 ]
C [ 1533 1479 1530 1467 1561 1564 1561 1483 1591 1522 1652 1590 1602 1674 1527 1761 1815 1505 1638 1656 2269 936 3031 3 4586 4582 8 7 1376 1545 1471 1426 1674 1485 1655 1559 1427 1623 1405 1436 1565 1464 1518 1512 1456 1522 1471 1432 1515 1573 ]
G [ 1408 1398 1358 1395 1361 1326 1397 1422 1398 1510 1349 1345 1460 1377 1402 1373 1308 1493 1452 1398 869 1027 1 7 2 8 10 4527 1570 1529 1587 1718 1371 1558 1494 1419 1620 1381 1434 1437 1380 1420 1417 1343 1435 1406 1370 1413 1448 1332 ]
T [ 821 864 854 858 868 852 853 797 829 750 830 836 818 793 890 776 734 704 767 662 934 1750 1527 2 4 2 4574 37 1178 614 826 715 756 728 740 771 775 797 916 826 815 827 856 811 880 855 865 882 795 849 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.00 -0.01 0.07 -0.03 -0.05 -0.04 -0.01 -0.01 -0.01 -0.01 -0.01 ]
C [ 0.00 0.01 0.01 -0.00 0.03 -0.03 0.06 0.05 -0.02 -0.02 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 -0.03 -0.02 0.01 0.02 -0.01 0.03 0.00 0.01 0.01 0.01 ]
T [ -0.01 -0.01 -0.00 0.00 0.02 -0.03 -0.05 -0.04 0.06 -0.01 0.00 -0.01 -0.01 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 107

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 77

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 66

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 64

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 64

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 61

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 26

CWM

PFM

     

HCWM

3 profiles found for the same TF (ZEB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000744.1 ZEB1 ENCSR000BVN HepG2 Homo sapiens MA0103.4
BP000745.1 ZEB1 ENCSR418KUS bipolar neuron Homo sapiens MA0103.4
BP000746.1 ZEB1 ENCSR909HMT HEK293 Homo sapiens MA0103.4
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)