Detailed information of deep learning profile BP000728.1

This page shows detailed deep learning-derived predictions and motifs for USF2 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000728.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0526.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR945NFL
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 -0.00 0.08 0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.11 -0.00 0.07 -0.00 0.00 0.00 -0.00 0.03 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 -0.00 0.00 0.00 -0.00 0.09 -0.00 0.11 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 0.00 -0.00 0.00 -0.00 0.08 -0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

A [ 449 446 464 414 400 445 457 423 428 403 416 405 383 404 484 458 418 403 390 358 318 602 225 2 2256 1 105 4 0 1835 27 222 408 429 430 418 375 369 385 481 420 382 478 564 522 416 433 473 465 488 ]
C [ 790 809 731 751 820 727 676 722 711 719 718 756 818 802 756 685 780 838 763 742 661 656 976 2332 15 1860 51 3 1 115 1778 1020 837 727 726 717 792 757 728 700 749 895 805 693 668 701 727 722 715 701 ]
G [ 712 670 693 704 679 696 723 681 728 778 781 767 695 622 686 800 750 652 810 796 1080 879 458 0 46 74 2177 4 2332 302 168 499 675 783 804 726 750 745 786 770 753 657 670 657 743 699 769 756 724 709 ]
T [ 383 409 446 465 435 466 478 508 467 434 419 406 438 506 408 391 386 441 371 438 275 197 675 0 17 399 1 2323 1 82 361 593 414 395 374 473 417 463 435 383 412 400 381 420 401 518 405 383 430 436 ]

Hypothetical CWM

A [ -0.00 -0.01 0.01 -0.02 -0.04 0.08 -0.08 0.01 -0.04 -0.05 0.04 -0.03 -0.01 -0.00 -0.00 0.00 ]
C [ 0.01 0.02 0.00 0.01 0.11 -0.05 0.09 -0.03 0.01 -0.06 -0.01 0.04 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.02 0.03 -0.00 -0.06 0.02 -0.04 0.09 -0.04 0.11 0.00 -0.01 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.03 0.04 -0.05 -0.04 0.01 -0.09 0.08 -0.03 -0.02 0.01 -0.01 -0.00 -0.00 0.00 ]

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000727.1 USF2 ENCSR578KEN K562 Homo sapiens MA0526.5
Showing 1 profiles of page 2 from 2 pages