Detailed information of deep learning profile BP000722.1

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This page shows detailed deep learning-derived predictions and motifs for USF2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF2
Model ID: BP000722.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0526.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q15853  
Source: ENCSR145QNL
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.07 0.00 0.00 -0.00 0.00 0.04 -0.00 -0.00 -0.00 -0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.11 -0.00 0.07 0.00 0.00 0.00 -0.00 0.04 0.01 0.00 -0.00 0.00 ]
G [ 0.00 0.01 0.02 -0.00 0.00 0.00 -0.00 0.08 -0.00 0.11 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.00 0.00 0.09 0.00 -0.00 0.00 -0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1457 1350 1490 1434 1327 1336 1451 1303 1335 1320 1423 1382 1301 1307 1638 1413 1354 1350 1401 1290 1359 1869 851 13 6415 12 394 5 6 5086 197 918 1351 1563 1452 1238 1198 1230 1430 1442 1282 1172 1508 1920 1653 1293 1401 1670 1582 1602 ]
C [ 1976 2124 1950 2006 2031 1947 1861 1866 1779 1840 1868 1914 2042 2180 1922 1891 2046 2070 1865 1727 1464 1280 2728 6688 82 4608 322 18 7 429 4582 2990 2184 1787 1849 1836 2099 1928 1770 1828 2140 2483 2153 1758 1785 1943 1932 1789 1827 1821 ]
G [ 1928 1835 1852 1823 1866 2037 1827 1797 1958 2113 2161 2003 1769 1732 1786 2164 2021 1777 2152 1918 3025 2966 1338 3 99 410 5989 16 6691 970 635 989 1565 2022 2096 2099 1819 1930 2072 2176 2042 1699 1671 1747 1788 1855 1947 1935 1952 1802 ]
T [ 1347 1399 1416 1445 1484 1388 1569 1742 1636 1435 1256 1409 1596 1489 1362 1240 1287 1511 1290 1773 860 593 1791 4 112 1678 3 6669 4 223 1294 1811 1608 1336 1311 1535 1592 1620 1436 1262 1244 1354 1376 1283 1482 1617 1428 1314 1347 1483 ]

Hypothetical CWM

   
A [ 0.00 -0.00 0.00 -0.01 0.02 -0.02 -0.04 0.08 -0.08 0.01 -0.04 -0.05 0.05 -0.03 -0.01 0.00 0.01 0.01 ]
C [ 0.01 0.02 0.01 0.02 0.00 0.01 0.11 -0.03 0.09 -0.01 0.01 -0.04 0.00 0.05 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.04 0.00 -0.04 0.01 -0.01 0.09 -0.03 0.11 0.01 -0.00 0.02 0.01 0.02 0.01 ]
T [ 0.00 0.00 0.00 -0.01 -0.02 0.04 -0.04 -0.03 0.02 -0.08 0.09 -0.03 -0.02 0.02 -0.00 0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 599

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 76

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

11 profiles found for the same TF (USF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000728.1 USF2 ENCSR945NFL SK-N-SH Homo sapiens MA0526.5
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