Detailed information of deep learning profile BP000707.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000707.1
Cell line/tissue: GM12878
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR841NDX
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 -0.00 0.00 0.04 0.04 -0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.01 0.01 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 0.00 -0.00 0.00 0.03 0.03 0.00 -0.00 0.00 -0.00 0.00 0.01 0.00 ]

Frequency matrix

       
A [ 5008 5064 5170 4997 4963 5023 4953 4941 4900 4798 5032 4821 4909 5313 5346 4486 4524 4016 2471 2730 13985 78 380 33 5 0 35 693 4170 4123 3465 3346 4553 4497 4996 4962 4837 4758 4921 4916 4970 5038 4768 4915 4921 4900 5057 4955 5031 4941 ]
C [ 6988 6993 6754 6964 6909 6946 7093 7028 7115 7066 6937 7080 7259 7149 6611 7550 6767 6858 8892 12138 2048 18312 13 11 23572 23603 1103 6381 5764 4799 5772 8065 6671 6703 6776 6606 6871 7046 6821 6914 6958 6667 6877 6865 6743 6977 6873 6864 6899 6941 ]
G [ 6224 6204 6231 6305 6221 6177 6194 6059 6158 6223 6002 6337 6141 5908 6524 6207 5162 6606 5404 4041 5196 2210 45 24 10 0 9616 13866 6400 3339 3950 5664 6411 6991 6509 6407 6421 5994 6152 6277 6185 6191 6387 6236 6328 6310 6101 6174 6100 6163 ]
T [ 5406 5365 5471 5360 5533 5480 5386 5598 5453 5539 5655 5388 5317 5256 5145 5383 7173 6146 6859 4717 2397 3026 23188 23558 39 23 12872 2686 7292 11365 10439 6551 5991 5435 5345 5651 5497 5828 5732 5519 5513 5730 5594 5610 5634 5439 5595 5633 5596 5581 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 -0.00 0.01 -0.02 0.00 -0.00 -0.01 -0.02 -0.03 -0.01 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.01 -0.01 0.02 -0.02 -0.02 0.04 0.04 -0.00 0.01 -0.00 -0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 0.00 -0.01 -0.01 -0.01 -0.01 0.03 0.02 0.01 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.03 0.03 -0.01 -0.01 0.01 -0.00 0.01 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1371

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1018

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 823

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 663

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 479

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 354

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 93

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 44

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000705.1 ELF1 ENCSR502OEK K562 Homo sapiens MA0473.4
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages