Detailed information of deep learning profile BP000704.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000704.1
Cell line/tissue: MCF-7
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR502NRF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 0.02 0.00 0.00 0.07 0.08 -0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
G [ 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.03 0.02 0.00 -0.00 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.06 0.06 0.00 0.00 0.01 -0.00 0.00 0.01 0.01 0.00 ]

Frequency matrix

       
A [ 3025 2988 3081 2895 3070 3004 2906 2924 2990 3016 3037 2980 2964 3319 3065 2833 3047 2495 1532 1986 8078 49 186 31 2 0 10 254 2568 3188 2421 2199 2747 2639 2758 2891 2854 2929 2902 2921 3101 2892 2942 2875 2917 2863 2936 2877 3064 2985 ]
C [ 4984 5080 4757 5102 5028 5074 5180 5301 5074 4955 5129 5129 5275 5107 4825 5630 5276 4831 6388 7785 1567 12560 0 6 15819 15825 279 3184 3868 3499 4451 6046 4966 4747 4982 4891 4897 5004 4830 4993 5023 5183 5035 4960 4750 5062 4961 5124 4949 4997 ]
G [ 4654 4533 4754 4846 4522 4540 4634 4546 4614 4734 4496 4665 4603 4415 4941 4306 4112 5265 4980 3052 4342 1095 17 6 5 1 9010 11307 6024 2241 3049 4229 4754 5172 4901 4681 4983 4542 4622 4624 4475 4476 4652 4598 4755 4682 4670 4576 4565 4667 ]
T [ 3163 3225 3234 2983 3206 3208 3106 3055 3148 3121 3164 3052 2984 2985 2995 3057 3391 3235 2926 3003 1839 2122 15623 15783 0 0 6527 1081 3366 6898 5905 3352 3359 3268 3185 3363 3092 3351 3472 3288 3227 3275 3197 3393 3404 3219 3259 3249 3248 3177 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.02 -0.03 0.00 -0.00 -0.02 -0.03 -0.05 -0.03 0.01 0.01 0.01 -0.00 ]
C [ 0.00 0.01 0.01 0.01 -0.01 0.03 -0.04 -0.03 0.07 0.08 -0.01 0.01 -0.00 -0.00 0.00 0.01 ]
G [ 0.00 0.01 0.01 0.00 0.01 0.00 -0.01 -0.02 -0.02 -0.02 0.05 0.03 0.01 -0.01 -0.00 0.01 ]
T [ 0.00 -0.00 -0.00 0.00 -0.01 0.01 0.06 0.06 -0.03 -0.03 0.02 -0.00 0.01 0.02 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 717

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 133

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 50

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000707.1 ELF1 ENCSR841NDX GM12878 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages