Detailed information of deep learning profile BP000700.1

  1. Home
  2. Deep Learning Profile > BP000700.1
This page shows detailed deep learning-derived predictions and motifs for ELF1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000700.1
Cell line/tissue: SK-N-SH
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BTA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.01 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 0.01 -0.00 0.00 0.04 0.06 -0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.01 0.00 -0.00 -0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.04 0.04 0.00 0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

       
A [ 1924 1948 1982 1960 1850 1892 1894 1869 1973 1890 1918 1987 2012 1948 2150 1731 1184 1243 5279 89 142 9 8 0 10 143 1782 2200 1569 1311 1641 1776 1774 1857 1855 1883 1862 1988 1970 1891 1901 1844 1868 1905 1933 1895 1918 1965 2032 1903 ]
C [ 3049 3168 3179 3154 3291 3339 3178 3173 3228 3146 3202 3210 3025 3363 3332 2950 4012 4661 893 7748 3 24 10032 10046 122 2239 2561 2042 2565 3885 3250 2821 3113 3029 3055 3178 3045 3158 3050 3141 3107 3095 3013 3109 3102 3110 3105 3100 2954 3045 ]
G [ 2990 2904 2797 2875 2880 2745 2909 2950 2721 2989 2908 2870 3078 2785 2512 3262 2605 2038 2610 743 16 13 6 0 6316 7027 3563 1426 1990 2630 2835 3158 3153 3072 3162 2941 3002 2847 2851 2851 2977 2993 3028 2940 2930 2934 2913 2928 2899 2960 ]
T [ 2083 2026 2088 2057 2025 2070 2065 2054 2124 2021 2018 1979 1931 1950 2052 2103 2245 2104 1264 1466 9885 10000 0 0 3598 637 2140 4378 3922 2220 2320 2291 2006 2088 1974 2044 2137 2053 2175 2163 2061 2114 2137 2092 2081 2107 2110 2053 2161 2138 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.01 -0.01 0.00 -0.01 -0.01 -0.03 -0.04 -0.02 0.01 0.01 0.00 -0.00 ]
C [ 0.00 0.01 0.01 -0.01 0.02 -0.03 -0.02 0.04 0.06 -0.00 0.01 -0.00 -0.00 -0.00 0.01 ]
G [ 0.01 0.00 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.01 0.04 0.02 0.01 -0.01 -0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.01 0.04 0.04 -0.02 -0.03 0.01 -0.00 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1235

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 901

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 289

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 272

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 31

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000707.1 ELF1 ENCSR841NDX GM12878 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages