Detailed information of deep learning profile BP000698.1

This page shows detailed deep learning-derived predictions and motifs for ELF1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000698.1
Cell line/tissue: A549
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BPT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Contribution weight matrix (CWM)

A [ 0.00 -0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.02 0.00 0.00 0.05 0.07 0.00 0.00 -0.00 -0.00 -0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.04 0.02 0.01 -0.00 -0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.05 0.05 -0.00 -0.00 0.00 -0.00 -0.00 0.01 0.00 ]

Frequency matrix

A [ 1615 1607 1663 1651 1564 1587 1601 1549 1688 1578 1646 1752 1747 1614 1767 1404 975 1003 4581 86 113 31 14 1 7 107 1245 1703 1275 1196 1412 1449 1489 1567 1609 1531 1568 1617 1709 1554 1573 1553 1567 1532 1595 1601 1666 1677 1714 1550 ]
C [ 2614 2831 2799 2704 2782 2918 2755 2727 2746 2740 2675 2792 2556 2939 2883 2591 3493 4083 713 6773 8 50 8523 8558 54 2006 2225 1853 2359 3341 2776 2444 2772 2693 2617 2794 2658 2717 2597 2666 2689 2673 2590 2722 2715 2701 2695 2645 2546 2595 ]
G [ 2579 2530 2347 2493 2567 2375 2510 2642 2336 2551 2616 2385 2650 2415 2190 2871 2339 1797 2239 611 24 35 21 0 6064 5874 3185 1344 1697 2314 2598 2828 2697 2600 2707 2454 2588 2505 2502 2543 2657 2529 2588 2534 2500 2539 2441 2531 2490 2595 ]
T [ 1752 1592 1751 1712 1647 1680 1694 1642 1790 1691 1623 1631 1607 1592 1720 1694 1753 1677 1027 1090 8415 8444 2 1 2435 573 1905 3660 3229 1709 1774 1839 1602 1700 1627 1781 1746 1721 1752 1797 1641 1805 1815 1772 1750 1719 1758 1707 1810 1820 ]

Hypothetical CWM

A [ 0.00 -0.00 -0.01 0.02 -0.02 0.00 -0.00 -0.01 -0.03 -0.05 -0.03 0.00 0.01 0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.01 0.02 -0.03 -0.02 0.05 0.07 -0.01 0.01 -0.00 -0.00 -0.00 0.01 ]
G [ 0.00 0.01 0.00 0.01 -0.00 -0.01 -0.02 -0.02 -0.01 0.05 0.02 0.01 -0.01 -0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.00 0.05 0.05 -0.03 -0.04 0.00 -0.01 -0.00 0.01 0.01 0.00 ]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 534

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 239

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 195

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000707.1 ELF1 ENCSR841NDX GM12878 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages