Detailed information of deep learning profile BP000695.1

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This page shows detailed deep learning-derived predictions and motifs for ELF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ELF1
Model ID: BP000695.1
Cell line/tissue: GM12878
Class: Tryptophan cluster factors
Family: Ets-related
JASPAR ID: MA0473.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P32519  
Source: ENCSR000BMB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.01 -0.00 -0.00 0.00 0.00 -0.00 0.06 0.05 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ -0.00 -0.00 0.00 0.02 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.07 0.06 0.00 -0.00 0.03 -0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3244 3403 3282 3312 3274 3461 3252 3291 3443 3207 3283 3382 3318 3137 3295 3047 3087 3377 3423 5910 6855 4081 1074 6354 0 4 16535 16344 1713 1710 2896 3278 3168 3412 2870 2841 3008 3010 3026 3228 3177 3148 3122 3086 3274 3227 3101 3150 3104 3173 ]
C [ 5023 4917 4914 4901 5027 4983 4980 5082 4880 4860 4945 5018 4918 5314 5226 5388 5799 5252 4588 3460 2739 5405 11262 9859 0 0 4 10 1167 4724 3416 4750 5537 4346 4725 5132 4700 4820 5040 4781 4976 4899 4824 4940 4803 4766 5078 4976 4819 4863 ]
G [ 5320 5327 5420 5459 5445 5189 5492 5354 5267 5445 5387 5168 5511 5352 5160 5296 4937 5114 6450 5000 4146 4809 4065 336 16556 16551 4 1 13641 1665 8432 7006 5266 5710 6170 5385 5566 5736 5537 5507 5582 5589 5664 5635 5464 5502 5501 5348 5600 5522 ]
T [ 2969 2909 2940 2884 2810 2923 2832 2829 2966 3044 2941 2988 2809 2753 2875 2825 2733 2813 2095 2186 2816 2261 155 7 0 1 13 201 35 8457 1812 1522 2585 3088 2791 3198 3282 2990 2953 3040 2821 2920 2946 2895 3015 3061 2876 3082 3033 2998 ]

Hypothetical CWM

   
A [ -0.00 0.01 0.01 0.00 -0.01 0.01 -0.02 -0.02 0.06 0.05 0.00 -0.01 -0.00 -0.00 -0.00 0.00 ]
C [ 0.01 -0.00 -0.00 0.01 0.02 0.05 -0.02 -0.02 -0.02 -0.01 0.01 0.02 0.00 0.01 0.01 0.00 ]
G [ 0.01 0.00 0.00 0.00 0.02 -0.00 0.07 0.06 -0.03 -0.03 0.03 -0.01 0.02 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.03 -0.05 -0.04 -0.03 0.00 0.01 -0.03 0.02 -0.01 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 884

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 884

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 211

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 20

CWM

PFM

     

HCWM

13 profiles found for the same TF (ELF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000706.1 ELF1 ENCSR744CXJ K562 Homo sapiens MA0473.4
BP000707.1 ELF1 ENCSR841NDX GM12878 Homo sapiens MA0473.4
BP000708.1 ELF1 ENCSR975SSR K562 Homo sapiens MA0473.4
Showing 3 profiles of page 2 from 2 pages