Detailed information of deep learning profile BP000694.1

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This page shows detailed deep learning-derived predictions and motifs for CREB1 in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CREB1
Model ID: BP000694.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
JASPAR ID: MA0018.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P16220  
Source: ENCSR897JAS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.07 -0.00 0.00 0.01 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.08 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.07 0.00 -0.00 0.11 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.01 0.00 -0.00 0.06 0.00 0.00 0.01 0.00 0.08 -0.00 0.00 0.02 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1976 1926 2087 2135 2177 2168 2153 2230 1988 2046 2130 1922 2097 2107 2108 2216 2115 2124 2059 1417 1760 3855 23 14 6928 52 8 12 90 7119 71 2424 2842 2052 1765 1946 1899 2024 2023 2150 2082 2169 2091 2164 2001 2055 1995 1915 2057 1983 ]
C [ 1478 1533 1505 1451 1371 1390 1343 1445 1386 1385 1460 1507 1357 1442 1397 1297 1433 1399 1373 1712 821 402 31 30 30 8 8 17 7038 7 2346 2128 1092 1467 1444 1454 1492 1636 1401 1395 1432 1305 1442 1448 1400 1490 1481 1525 1498 1593 ]
G [ 1456 1596 1654 1446 1588 1567 1601 1572 1570 1612 1323 1519 1560 1547 1695 1620 1548 1592 1628 1176 2298 2783 7 7051 42 1169 7139 0 16 20 339 946 1866 1594 1590 1674 1399 1511 1659 1569 1678 1705 1565 1504 1582 1442 1412 1463 1519 1615 ]
T [ 2249 2104 1913 2127 2023 2034 2062 1912 2215 2116 2246 2211 2145 2063 1959 2026 2063 2044 2099 2854 2280 119 7098 64 159 5930 4 7130 15 13 4403 1661 1359 2046 2360 2085 2369 1988 2076 2045 1967 1980 2061 2043 2176 2172 2271 2256 2085 1968 ]

Hypothetical CWM

   
A [ -0.00 0.00 -0.01 -0.01 0.03 -0.05 -0.04 0.06 -0.09 0.01 -0.01 -0.01 0.07 -0.04 0.01 0.01 -0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 -0.01 0.01 -0.01 -0.06 0.12 -0.02 -0.05 0.08 -0.06 0.03 0.02 0.00 0.01 0.00 ]
G [ 0.01 0.01 0.00 0.02 0.03 -0.04 0.07 -0.03 -0.03 0.11 -0.08 -0.02 0.01 -0.01 0.00 0.01 0.00 0.00 ]
T [ -0.00 -0.00 0.01 0.00 -0.04 0.06 -0.00 -0.02 0.01 -0.08 0.08 -0.04 -0.06 0.03 -0.01 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 10195

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 4116

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 3810

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1336

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 764

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 364

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 294

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 246

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 230

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 158

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 127

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 103

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 58

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 55

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 54

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_22

Num. of seqlets: 20

CWM

PFM

     

HCWM

13 profiles found for the same TF (CREB1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000691.1 CREB1 ENCSR331ORD HepG2 Homo sapiens MA0018.5
BP000692.1 CREB1 ENCSR471WXT K562 Homo sapiens MA0018.5
BP000693.1 CREB1 ENCSR620DUQ MCF-7 Homo sapiens MA0018.5
Showing 3 profiles of page 2 from 2 pages