Detailed information of deep learning profile BP000674.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000674.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR282ZLP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.05 -0.00 -0.00 0.00 0.05 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.02 0.00 0.05 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 0.05 0.00 0.00 -0.00 0.04 0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1014 986 1039 966 1097 972 969 934 946 1003 1090 866 912 860 930 861 998 1036 1132 787 963 1762 2 2 4001 77 97 137 3975 177 804 757 853 789 849 1025 1139 1196 981 1129 956 829 1056 955 951 1094 927 946 903 915 ]
C [ 1050 1027 987 1031 1004 987 961 1025 1104 1091 933 935 1098 1168 1107 931 1034 1160 861 1113 647 668 4 5 5 3613 16 3854 21 1347 1413 1553 1396 1058 962 982 966 971 1006 1164 1149 1230 1055 1001 1251 1079 1177 962 958 954 ]
G [ 983 1017 1056 1066 1001 1082 986 1045 977 964 1108 1082 1017 961 1010 1192 1151 1035 1168 1101 1669 1452 5 3982 3 36 58 2 17 801 832 894 761 906 1205 912 1020 963 845 882 855 955 950 1102 945 954 961 1002 996 998 ]
T [ 971 988 936 955 916 977 1102 1014 991 960 887 1135 991 1029 971 1034 835 787 857 1017 739 136 4007 29 9 292 3847 25 5 1693 969 814 1008 1265 1002 1099 893 888 1186 843 1058 1004 957 960 871 891 953 1108 1161 1151 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.00 0.02 -0.03 -0.02 0.05 -0.01 -0.01 0.01 0.05 -0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.01 0.00 0.00 -0.00 -0.04 -0.01 0.02 -0.03 0.05 -0.02 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.02 0.05 -0.02 0.02 0.00 -0.03 -0.00 0.00 0.00 0.01 0.00 0.01 ]
T [ -0.00 0.00 0.00 0.00 -0.02 0.05 0.01 -0.01 -0.01 0.04 -0.02 -0.03 0.02 0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1642

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1599

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 700

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 326

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 320

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 160

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 150

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 135

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 33

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages