Detailed information of deep learning profile BP000673.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000673.1
Cell line/tissue: liver
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR196HGZ
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.05 -0.00 -0.00 0.00 0.07 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.07 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.06 -0.00 0.03 -0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.07 0.00 -0.00 -0.00 0.07 -0.00 0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1370 1366 1356 1185 1146 1131 1144 1211 1188 1261 1164 1327 1089 1030 1304 1334 1679 1340 1032 1326 2312 3 2 4512 152 3 35 4575 95 948 1178 975 1012 980 1117 1139 1194 1129 1305 1168 1155 1216 1249 1262 1190 1162 1177 1163 1270 1203 ]
C [ 1065 998 1008 1059 1032 999 1156 1055 1020 989 952 934 1008 1067 975 1236 896 868 994 803 748 5 2 13 6 3 4540 1 1669 1704 1137 1191 1041 1185 1397 1169 1016 1100 1197 1142 1056 1018 1108 1011 1088 1052 1173 1170 1060 1077 ]
G [ 1026 1055 1008 1245 1095 1296 1076 1074 1282 1179 1210 1163 1064 1272 1180 1042 1088 1364 1598 1470 1387 1 4476 12 4289 1 0 1 580 668 1275 976 1178 1083 991 1121 1233 1249 989 1019 1154 1162 1040 1088 1031 1073 1042 1012 1042 1084 ]
T [ 1116 1158 1205 1088 1304 1151 1201 1237 1087 1148 1251 1153 1416 1208 1118 965 914 1005 953 978 130 4568 97 40 130 4570 2 0 2233 1257 987 1435 1346 1329 1072 1148 1134 1099 1086 1248 1212 1181 1180 1216 1268 1290 1185 1232 1205 1213 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.01 0.02 -0.03 -0.03 0.05 -0.01 -0.02 0.02 0.07 -0.02 -0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.01 -0.04 -0.01 0.04 -0.02 0.07 -0.03 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.03 0.06 -0.02 0.03 -0.02 -0.04 -0.01 -0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.00 -0.00 -0.02 0.07 0.02 -0.01 -0.01 0.07 -0.03 -0.04 0.03 0.01 -0.00 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3525

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2075

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1517

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1098

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 490

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 318

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 300

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 34

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages