Detailed information of deep learning profile BP000671.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000671.1
Cell line/tissue: SK-N-SH
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EIB
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.09 -0.00 -0.00 0.00 0.10 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.12 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.01 0.00 0.10 -0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.09 0.00 -0.00 -0.00 0.11 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 5289 5396 5238 5216 5303 5891 5877 5900 5406 5263 5395 5426 5652 5646 6061 4916 5796 5223 4807 5879 5744 6869 5608 4607 4870 10664 217 161 18595 1939 47 619 19140 432 4657 5611 4919 4842 4842 5394 5311 5442 5277 5746 4881 5054 5325 5511 5570 5400 ]
C [ 4628 3951 4511 4768 4643 4062 4050 3960 3852 4036 3914 4440 3795 4202 3702 3688 3732 4377 4580 3849 4493 3550 3338 3526 3467 3145 317 237 144 238 26 18562 23 5793 7063 4747 4837 4207 4634 4669 4171 3930 4190 4397 4479 4187 4176 4196 3971 4140 ]
G [ 3996 4046 4088 4059 4033 3940 4028 4036 4644 4002 4610 4118 4244 4661 4433 4524 4324 3842 3838 4012 4053 4323 5500 6324 6163 4441 125 16775 72 16423 36 16 34 2586 2660 4252 3691 4412 3841 3873 4523 4805 4465 3965 4026 4384 4123 4161 4033 4186 ]
T [ 5314 5834 5390 5184 5248 5334 5272 5331 5325 5926 5308 5243 5536 4718 5031 6099 5375 5785 6002 5487 4937 4485 4781 4770 4727 977 18568 2054 416 627 19118 30 30 10416 4847 4617 5780 5766 5910 5291 5222 5050 5295 5119 5841 5602 5603 5359 5653 5501 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.04 -0.07 -0.06 0.09 -0.02 -0.04 0.02 0.10 -0.05 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.02 0.01 0.00 0.02 -0.06 -0.01 0.05 -0.04 0.12 -0.06 0.03 0.04 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.03 0.03 -0.05 0.11 -0.06 0.05 -0.03 -0.06 0.02 0.01 0.01 0.02 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.05 0.09 0.03 -0.04 -0.03 0.11 -0.06 -0.07 0.05 -0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2606

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2239

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 878

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 78

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 44

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 34

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 21

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages