Detailed information of deep learning profile BP000670.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000670.1
Cell line/tissue: K562
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EGN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.13 -0.00 -0.00 0.00 0.12 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.07 -0.00 0.11 0.00 0.01 0.02 0.01 0.01 ]
G [ 0.01 0.00 0.02 0.01 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.14 0.00 -0.00 -0.00 0.10 0.00 -0.00 0.02 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 3722 3824 3517 3481 3731 3385 3288 3352 3357 3693 3370 3729 3665 4113 3104 3387 6716 3 7 13832 115 425 1095 13666 539 2742 3660 2984 3008 3210 3063 4068 4487 3283 3428 3169 3286 4367 3292 3266 4357 3329 3479 3310 3321 3329 3409 3360 4367 3508 ]
C [ 3164 3047 3315 3631 3371 3129 3138 4000 3926 3266 2968 3159 3795 2803 3485 2083 2181 1 0 2 12838 11 12648 23 3575 5322 4850 4709 3127 2930 3368 3381 3123 3376 4160 4105 4212 3187 3170 4188 3118 4188 2985 3078 3129 3035 3006 3224 3136 2918 ]
G [ 3476 3195 3397 3018 3214 3955 4039 3156 3069 3629 4278 3985 3400 4095 3475 5746 4670 0 13581 0 7 93 17 88 3778 2839 2547 2573 2682 3934 2914 3081 2922 2816 2965 2976 2973 2959 3934 2962 3035 2934 2958 3047 2996 4044 4009 3939 3055 4042 ]
T [ 3474 3770 3607 3706 3520 3367 3371 3328 3484 3248 3220 2963 2976 2825 3772 2620 269 13832 248 2 876 13307 76 59 5944 2933 2779 3570 5019 3762 4491 3306 3304 4361 3283 3586 3365 3323 3440 3420 3326 3385 4414 4401 4390 3428 3412 3313 3278 3368 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 -0.00 0.05 -0.07 -0.05 0.13 -0.03 -0.01 0.04 0.12 -0.04 -0.00 0.01 -0.00 -0.01 ]
C [ 0.02 0.02 0.02 0.01 0.01 0.02 -0.06 -0.03 0.07 -0.06 0.11 -0.05 0.03 0.05 0.03 0.02 0.02 ]
G [ 0.02 0.02 0.03 0.05 0.04 -0.07 0.13 -0.04 0.08 -0.00 -0.07 0.01 0.02 0.01 0.02 0.02 0.02 ]
T [ -0.01 -0.00 0.01 0.00 -0.05 0.14 0.03 -0.02 -0.02 0.10 -0.04 -0.07 0.04 -0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 9150

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 5615

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2954

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1869

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 694

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 167

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 142

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 55

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages