Detailed information of deep learning profile BP000668.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000668.1
Cell line/tissue: HeLa-S3
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000EDH
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.10 -0.00 -0.00 0.00 0.12 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 0.12 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.01 0.01 0.00 0.00 0.10 -0.00 0.05 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.11 0.00 -0.00 -0.00 0.12 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 4260 4282 4162 4154 4185 4812 4688 4718 4279 4165 4177 4303 4485 4398 4767 3871 4581 4105 3829 4813 4644 5418 4428 3898 3820 8054 93 124 14951 1568 16 360 15446 330 3590 4593 3908 3687 3830 4124 4177 4198 4107 4422 3973 4060 4288 4426 4361 4435 ]
C [ 3786 3224 3639 3847 3854 3181 3243 3213 3193 3187 3112 3560 3043 3405 2970 2983 2941 3463 3754 3131 3584 2942 2859 2848 2821 2776 138 80 78 331 12 15092 1 4506 5977 3877 3777 3408 3711 3896 3390 3136 3369 3740 3564 3294 3401 3382 3202 3304 ]
G [ 3109 3261 3265 3276 3216 3251 3366 3231 3774 3240 3857 3328 3328 3772 3735 3560 3507 3105 3151 3121 3257 3523 4348 4905 4971 3835 68 13231 52 13258 4 4 16 1860 2098 3283 3017 3603 3242 3100 3476 3778 3650 3233 3277 3624 3401 3250 3224 3279 ]
T [ 4310 4698 4399 4188 4210 4221 4168 4303 4219 4873 4319 4274 4609 3890 3993 5051 4436 4792 4731 4400 3980 3582 3830 3814 3853 800 15166 2030 384 308 15433 9 2 8769 3800 3712 4763 4767 4682 4345 4422 4353 4339 4070 4651 4487 4375 4407 4678 4447 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.01 0.00 0.05 -0.08 -0.05 0.10 -0.02 -0.04 0.04 0.12 -0.04 0.00 0.01 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 -0.00 0.01 -0.07 0.00 0.06 -0.05 0.12 -0.06 0.03 0.04 0.02 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.04 0.03 -0.05 0.11 -0.07 0.05 -0.03 -0.07 0.01 -0.00 -0.00 0.01 0.01 0.00 ]
T [ -0.00 -0.00 0.00 0.00 -0.04 0.11 0.04 -0.03 -0.03 0.12 -0.06 -0.08 0.05 0.00 -0.01 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2467

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2161

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2126

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 2064

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 799

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 785

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 526

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 243

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 174

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 48

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 36

CWM

PFM

     

HCWM

Motif name: counts.neg_patterns.pattern_1

Num. of seqlets: 32

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 24

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_17

Num. of seqlets: 21

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages