Detailed information of deep learning profile BP000666.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000666.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000DYS
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 0.00 0.00 0.01 -0.00 -0.00 0.05 -0.00 -0.00 0.00 0.05 -0.00 0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.04 0.00 0.00 0.00 0.00 0.01 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 0.00 -0.00 0.05 0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.01 0.00 0.00 -0.00 ]

Frequency matrix

       
A [ 670 655 692 648 674 622 687 689 703 665 567 586 628 707 695 680 657 1161 5 2 2485 72 32 155 2484 323 850 676 483 601 672 594 820 742 648 597 597 645 644 624 620 650 629 615 640 652 616 650 625 618 ]
C [ 598 575 636 636 608 619 590 578 568 533 523 670 729 647 536 510 233 506 8 7 3 2249 1 2321 1 460 708 632 850 589 495 561 678 672 596 614 658 606 540 580 583 583 597 581 597 609 623 619 586 593 ]
G [ 582 609 524 575 561 599 598 634 580 605 680 622 499 587 714 625 901 633 4 2383 2 85 29 13 4 464 225 413 453 591 701 748 462 492 452 619 569 601 639 599 585 564 597 552 559 569 583 520 580 576 ]
T [ 643 654 641 634 650 653 618 592 642 690 723 615 637 552 548 678 702 193 2476 101 3 87 2431 4 4 1246 710 772 707 712 625 590 533 587 797 663 669 641 670 690 705 696 670 745 697 663 671 704 702 706 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.01 0.02 -0.03 -0.03 0.05 -0.02 -0.02 0.01 0.05 -0.01 0.01 0.00 -0.01 -0.00 -0.00 ]
C [ 0.00 0.00 -0.01 0.00 0.00 -0.02 -0.02 0.02 -0.03 0.05 -0.03 -0.00 0.01 0.01 0.02 0.00 0.00 ]
G [ 0.02 0.01 0.01 0.00 -0.03 0.05 -0.03 0.03 -0.01 -0.02 0.00 -0.00 -0.02 0.00 0.00 0.01 0.01 ]
T [ -0.01 0.00 0.00 -0.01 0.05 0.01 -0.02 -0.02 0.05 -0.03 -0.03 0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1618

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1456

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 837

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 774

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 306

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 281

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 133

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages