Detailed information of deep learning profile BP000664.1

  1. Home
  2. Deep Learning Profile > BP000664.1
This page shows detailed deep learning-derived predictions and motifs for JUND in T47D using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000664.1
Cell line/tissue: T47D
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BVO
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 -0.00 0.00 0.03 -0.00 0.00 0.00 0.04 0.00 -0.00 0.00 0.00 ]
C [ 0.00 -0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 -0.00 ]
G [ -0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.01 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 ]
T [ 0.00 0.00 -0.00 0.00 0.03 0.00 -0.00 0.00 0.04 0.00 -0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 390 407 373 394 404 420 410 405 433 393 389 387 460 429 514 344 390 339 352 413 461 510 435 335 461 762 4 8 1480 69 0 15 1504 48 286 393 376 366 349 488 416 392 420 542 389 359 384 403 436 384 ]
C [ 382 341 351 346 362 341 352 352 362 370 378 335 298 380 285 258 293 395 424 317 368 353 305 315 278 293 1 3 9 12 0 1492 3 496 604 414 385 329 370 311 313 346 357 315 313 325 356 384 335 367 ]
G [ 348 359 358 360 340 322 335 308 345 324 358 361 388 367 340 324 365 330 287 297 320 325 396 546 464 404 8 1440 5 1414 3 0 0 244 209 382 305 399 322 303 418 400 322 313 324 432 310 348 335 320 ]
T [ 388 401 426 408 402 425 411 443 368 421 383 425 362 332 369 582 460 444 445 481 359 320 372 312 305 49 1495 57 14 13 1505 1 1 720 409 319 442 414 467 406 361 370 409 338 482 392 458 373 402 437 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.00 0.01 -0.02 -0.01 0.03 -0.01 -0.02 0.01 0.04 -0.01 -0.00 0.00 0.00 0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.02 -0.00 0.02 -0.01 0.03 -0.02 0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.01 -0.02 0.03 -0.01 0.01 -0.01 -0.02 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.04 -0.02 -0.02 0.01 0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1274

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1085

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 728

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 602

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 555

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 188

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 146

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 72

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 52

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages