Detailed information of deep learning profile BP000663.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000663.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BSU
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 0.00 0.06 -0.00 -0.00 0.00 0.07 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00 0.06 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.05 -0.00 0.02 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.07 0.00 -0.00 -0.00 0.07 0.00 0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1706 1695 1691 1668 1760 1847 1854 1859 1738 1741 1683 1696 1750 1768 1938 1556 1844 1566 1524 1787 1809 2100 1822 1521 1692 3138 2 13 6729 550 1 58 6775 156 1405 1640 1512 1451 1493 1841 1746 1755 1812 1925 1726 1679 1717 1816 1829 1761 ]
C [ 1853 1574 1770 1806 1782 1623 1625 1582 1587 1560 1595 1676 1586 1637 1525 1431 1390 1668 1799 1509 1725 1493 1453 1375 1169 1368 9 2 12 55 1 6713 1 2571 2698 1884 1781 1658 1822 1881 1725 1582 1605 1709 1637 1589 1614 1706 1603 1676 ]
G [ 1580 1655 1599 1650 1564 1632 1605 1593 1711 1575 1786 1620 1684 1771 1699 1778 1718 1585 1504 1595 1712 1747 2020 2375 2432 2063 6 6476 11 6028 0 5 0 1074 971 1752 1573 1858 1623 1489 1697 1838 1679 1566 1590 1852 1730 1673 1606 1616 ]
T [ 1638 1853 1717 1653 1671 1675 1693 1743 1741 1901 1713 1785 1757 1601 1615 2012 1825 1958 1950 1886 1531 1437 1482 1506 1484 208 6760 286 25 144 6775 1 1 2976 1703 1501 1911 1810 1839 1566 1609 1602 1681 1577 1824 1657 1716 1582 1739 1724 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.01 0.02 -0.04 -0.03 0.06 -0.01 -0.03 0.01 0.07 -0.03 -0.00 0.00 0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 -0.00 -0.03 -0.01 0.03 -0.02 0.06 -0.03 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.03 0.06 -0.03 0.03 -0.02 -0.03 -0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.00 -0.00 -0.02 0.07 0.01 -0.03 -0.02 0.07 -0.03 -0.04 0.03 0.01 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1817

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1714

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 420

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 233

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 74

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 56

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages