Detailed information of deep learning profile BP000662.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000662.1
Cell line/tissue: SK-N-SH
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BSK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.06 -0.00 -0.00 0.00 0.05 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.06 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.06 0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.01 -0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5835 6121 5775 6091 6024 6525 5453 5743 5615 5700 5475 6657 5974 5995 5356 6044 10303 10 1 20821 838 248 3653 20539 1021 5334 5130 5076 4947 5367 6506 6525 6232 6085 7489 5221 4880 5600 5523 5781 6257 5585 6008 5892 5844 5690 5691 5889 6094 5851 ]
C [ 4534 4327 4525 4489 4761 4241 4282 4560 5133 5027 4346 4129 4815 4079 4649 2771 3401 20 2 1 16414 25 17012 40 4362 5987 6369 5878 4717 4315 4119 4068 4109 4953 4456 4496 4798 4800 4630 4903 4311 4870 4345 4470 4376 4430 4467 4544 4423 4236 ]
G [ 4502 4490 4594 4554 4551 4669 4661 4770 4398 4291 4838 4709 5125 5500 5122 6856 6457 2 20768 3 1291 61 67 150 3999 4073 4195 3948 4183 4680 4295 5373 5054 3852 3684 3834 4880 4046 4758 4300 4515 4553 4351 4347 4368 4915 4919 4706 4338 4924 ]
T [ 5955 5888 5932 5692 5490 5391 6430 5753 5680 5808 6167 5331 4912 5252 5699 5155 665 20794 55 1 2283 20492 94 97 11444 5432 5132 5924 6979 6464 5906 4860 5431 5936 5197 7275 6268 6380 5915 5842 5743 5818 6122 6117 6238 5791 5749 5687 5971 5815 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 0.00 0.03 -0.03 -0.02 0.06 -0.01 -0.01 0.02 0.05 -0.02 0.00 0.00 0.00 0.00 ]
C [ 0.00 0.01 0.01 0.00 0.00 0.01 -0.03 -0.02 0.02 -0.03 0.05 -0.03 0.01 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.01 -0.03 0.06 -0.02 0.03 -0.01 -0.03 0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 0.00 0.00 0.00 -0.02 0.06 0.02 -0.02 -0.00 0.05 -0.02 -0.03 0.03 0.00 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2355

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 869

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 756

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 638

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 314

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 272

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 243

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 209

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 159

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 73

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages