Detailed information of deep learning profile BP000661.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000661.1
Cell line/tissue: HCT116
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BSA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.05 -0.00 -0.00 0.00 0.06 -0.00 -0.00 0.00 0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 -0.00 0.06 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.04 -0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.05 0.00 -0.00 -0.00 0.06 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 4703 4567 4550 4560 4791 5641 5451 5484 4674 4706 4672 4831 4771 5042 5494 4218 5175 4651 4347 5710 5177 6507 5258 4295 4614 9176 62 79 17833 1567 5 65 18160 553 4267 4792 4239 4265 4153 4839 4550 4896 4918 5189 4341 4642 5036 5245 4929 4754 ]
C [ 4910 3987 4651 4956 4969 3854 3997 3802 3960 3777 3770 4594 3822 4211 3509 3398 3485 4047 4398 3591 4612 3788 3347 3451 3743 3661 161 58 47 948 3 18106 1 6527 6402 4194 4915 4269 4582 5046 4416 3970 4057 4548 4529 4073 4044 4156 4083 4386 ]
G [ 3840 4070 4048 3992 3899 4012 4105 4161 4791 3979 5168 4089 4448 4789 4873 4843 4489 3670 3947 4035 3744 4076 5610 6168 5509 4435 45 15004 22 15046 2 9 21 3142 2628 4701 3598 4892 4133 3790 4325 4759 4584 4046 4176 4343 4311 4053 3936 4045 ]
T [ 4732 5561 4936 4677 4526 4678 4632 4738 4760 5723 4575 4671 5144 4143 4309 5726 5036 5817 5493 4849 4652 3814 3970 4271 4319 913 17917 3044 283 624 18175 5 3 7963 4888 4498 5433 4759 5317 4510 4894 4560 4626 4402 5139 5127 4794 4731 5237 5000 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.00 0.00 0.02 -0.04 -0.03 0.05 -0.01 -0.02 0.02 0.06 -0.02 0.00 0.01 0.00 -0.00 ]
C [ 0.00 0.00 0.01 -0.00 -0.00 0.00 -0.03 -0.01 0.02 -0.03 0.06 -0.04 0.01 0.02 0.01 0.01 0.01 ]
G [ 0.00 0.01 0.01 0.01 0.01 -0.03 0.05 -0.03 0.02 -0.02 -0.03 0.01 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 0.01 0.00 -0.02 0.05 0.02 -0.01 -0.02 0.06 -0.03 -0.04 0.03 0.00 -0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 420

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 20

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages