Detailed information of deep learning profile BP000661.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000661.1
Cell line/tissue: HCT116
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BSA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.01 -0.00 -0.00 0.06 -0.00 -0.00 0.00 0.05 -0.00 -0.00 0.00 -0.00 ]
C [ -0.00 0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.06 -0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ 0.00 0.00 -0.00 -0.00 0.06 0.00 -0.00 -0.00 0.05 -0.00 -0.00 0.01 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 5000 5237 4731 4794 5127 5139 4402 4626 4560 4894 4510 5317 4759 5433 4498 4888 7963 3 5 18175 624 283 3044 17917 913 4319 4271 3970 3814 4652 4849 5493 5817 5036 5726 4309 4143 5144 4671 4575 5723 4760 4738 4632 4678 4526 4677 4936 5561 4732 ]
C [ 4045 3936 4053 4311 4343 4176 4046 4584 4759 4325 3790 4133 4892 3598 4701 2628 3142 21 9 2 15046 22 15004 45 4435 5509 6168 5610 4076 3744 4035 3947 3670 4489 4843 4873 4789 4448 4089 5168 3979 4791 4161 4105 4012 3899 3992 4048 4070 3840 ]
G [ 4386 4083 4156 4044 4073 4529 4548 4057 3970 4416 5046 4582 4269 4915 4194 6402 6527 1 18106 3 948 47 58 161 3661 3743 3451 3347 3788 4612 3591 4398 4047 3485 3398 3509 4211 3822 4594 3770 3777 3960 3802 3997 3854 4969 4956 4651 3987 4910 ]
T [ 4754 4929 5245 5036 4642 4341 5189 4918 4896 4550 4839 4153 4265 4239 4792 4267 553 18160 65 5 1567 17833 79 62 9176 4614 4295 5258 6507 5177 5710 4347 4651 5175 4218 5494 5042 4771 4831 4672 4706 4674 5484 5451 5641 4791 4560 4550 4567 4703 ]

Hypothetical CWM

   
A [ 0.00 0.00 -0.00 0.00 0.03 -0.04 -0.03 0.06 -0.02 -0.01 0.02 0.05 -0.02 0.00 0.01 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.01 -0.03 -0.02 0.02 -0.03 0.05 -0.03 0.01 0.01 0.01 0.01 0.00 ]
G [ 0.01 0.01 0.01 0.02 0.01 -0.04 0.06 -0.03 0.02 -0.01 -0.03 0.00 -0.00 -0.00 0.01 0.00 0.00 ]
T [ -0.00 0.00 0.01 0.00 -0.02 0.06 0.02 -0.02 -0.01 0.05 -0.03 -0.04 0.02 0.00 -0.00 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 563

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 420

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 271

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 104

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 20

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages