Detailed information of deep learning profile BP000660.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000660.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BRF
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.07 -0.00 -0.00 0.00 0.06 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.02 -0.00 0.06 -0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.00 0.07 -0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.07 0.00 -0.00 -0.00 0.06 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2378 2320 2336 2239 2484 2368 2356 2180 2315 2292 2485 2106 2213 2291 2164 2186 2475 2446 2500 1906 2373 3872 4 0 9269 383 130 17 9249 408 2044 1958 1971 1924 2057 2431 2415 2471 2420 2697 2143 2059 2382 2307 2215 2447 2254 2408 2249 2230 ]
C [ 2357 2318 2296 2304 2367 2245 2210 2352 2373 2567 2179 2210 2394 2456 2481 2161 2368 2553 2098 2638 1520 1815 17 3 9 7871 7 9274 9 2907 3212 3179 2969 2542 2355 2341 2250 2244 2408 2368 2345 2525 2314 2332 2544 2308 2472 2241 2292 2203 ]
G [ 2296 2290 2338 2400 2222 2362 2318 2337 2299 2214 2324 2395 2357 2273 2361 2562 2428 2409 2665 2630 3430 3262 1 9273 9 12 28 1 30 2340 1745 2209 1950 2067 2482 2159 2489 2372 2045 2082 2147 2335 2207 2357 2331 2279 2263 2333 2234 2372 ]
T [ 2264 2367 2325 2352 2222 2320 2411 2426 2308 2222 2307 2584 2331 2275 2289 2386 2024 1887 2032 2121 1972 346 9273 19 8 1029 9130 3 7 3640 2294 1949 2405 2762 2401 2364 2141 2208 2422 2148 2660 2376 2392 2299 2205 2261 2306 2313 2520 2490 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.00 0.02 -0.05 -0.04 0.07 -0.02 -0.02 0.02 0.07 -0.03 -0.00 0.00 -0.00 -0.01 ]
C [ 0.01 0.01 0.01 0.00 0.00 0.00 -0.05 -0.02 0.03 -0.03 0.06 -0.04 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.04 0.07 -0.02 0.03 -0.00 -0.04 0.01 0.00 0.01 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 -0.00 -0.03 0.07 0.02 -0.03 -0.01 0.06 -0.04 -0.04 0.02 -0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1488

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1208

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 713

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 192

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 182

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 177

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 168

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 125

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 109

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 20

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages