Detailed information of deep learning profile BP000659.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000659.1
Cell line/tissue: H1
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BKP
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 0.00 0.00 0.06 -0.00 0.00 0.00 0.07 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.00 0.00 0.06 0.00 0.03 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.06 0.00 -0.00 -0.00 0.07 0.00 0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 669 604 543 611 619 631 604 707 557 672 535 520 683 660 843 686 489 550 1177 0 0 2737 56 0 15 2745 43 422 624 481 521 560 603 608 543 647 701 578 582 574 651 673 593 589 603 586 577 619 594 590 ]
C [ 753 704 746 710 806 691 739 694 652 659 736 747 654 823 639 568 561 494 572 9 0 10 4 2 2734 1 1046 1335 889 974 803 794 927 810 748 772 816 784 724 745 777 715 792 753 766 791 762 733 728 680 ]
G [ 727 836 811 842 775 793 848 823 838 799 824 833 815 762 805 1010 1153 1265 942 1 2697 1 2655 0 0 3 491 402 771 593 738 715 654 776 936 791 693 692 836 795 744 760 747 754 767 744 756 805 781 810 ]
T [ 600 605 649 586 549 634 558 525 702 619 654 649 597 504 462 485 546 440 58 2739 52 1 34 2747 0 0 1169 590 465 701 687 680 565 555 522 539 539 695 607 635 577 601 617 653 613 628 654 592 646 669 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.02 -0.04 -0.02 0.06 -0.02 -0.03 0.01 0.07 -0.03 -0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.01 0.00 0.00 -0.03 -0.00 0.04 -0.02 0.06 -0.03 0.02 0.02 0.01 0.02 0.01 ]
G [ 0.01 0.02 0.01 0.02 0.02 -0.02 0.06 -0.03 0.03 -0.01 -0.03 0.00 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.01 -0.01 0.00 -0.00 -0.03 0.06 0.01 -0.02 -0.02 0.07 -0.02 -0.05 0.03 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1221

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1139

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 154

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 89

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 54

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000658.1 JUND ENCSR000BGK HepG2 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages