Detailed information of deep learning profile BP000658.1

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This page shows detailed deep learning-derived predictions and motifs for JUND in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUND
Model ID: BP000658.1
Cell line/tissue: HepG2
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1141.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17535  
Source: ENCSR000BGK
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.01 -0.00 -0.00 0.07 -0.00 -0.00 0.00 0.07 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.03 -0.00 0.07 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.00 0.08 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 0.00 0.08 0.00 0.00 -0.00 0.06 0.00 -0.00 0.01 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2516 2329 2492 2389 2621 2427 2375 2238 2308 2403 2543 2171 2186 2159 2313 2080 2450 2442 2706 1991 2402 4185 1 2 9588 281 135 375 9551 322 1932 1909 2027 2014 2099 2483 2560 2798 2412 2676 2276 2112 2550 2362 2279 2637 2234 2338 2224 2260 ]
C [ 2409 2472 2352 2467 2378 2292 2292 2389 2521 2610 2238 2191 2596 2658 2455 2253 2433 2720 2106 2604 1477 1486 8 3 3 8645 15 9197 18 2974 3464 3603 3245 2444 2299 2354 2317 2266 2508 2665 2656 2805 2479 2365 2890 2473 2716 2354 2325 2325 ]
G [ 2315 2342 2449 2427 2312 2517 2334 2502 2327 2274 2529 2577 2454 2338 2518 2797 2607 2436 2743 2652 3868 3655 4 9483 4 31 84 7 19 1912 1835 2110 1855 2064 2826 2108 2510 2292 1914 2131 2117 2344 2239 2544 2203 2230 2242 2258 2391 2325 ]
T [ 2362 2459 2309 2319 2291 2366 2601 2473 2446 2315 2292 2663 2366 2447 2316 2472 2112 2004 2047 2355 1855 276 9589 114 7 645 9368 23 14 4394 2371 1980 2475 3080 2378 2657 2215 2246 2768 2130 2553 2341 2334 2331 2230 2262 2410 2652 2662 2692 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 0.00 0.03 -0.04 -0.03 0.07 -0.02 -0.02 0.02 0.07 -0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 -0.00 0.00 -0.05 -0.02 0.03 -0.03 0.07 -0.04 0.02 0.02 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.02 0.02 -0.04 0.08 -0.03 0.03 -0.00 -0.05 0.00 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.01 0.00 0.00 -0.00 -0.03 0.08 0.01 -0.02 -0.01 0.06 -0.03 -0.03 0.03 0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3353

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2955

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 960

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 616

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 606

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 582

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 414

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 376

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 64

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 50

CWM

PFM

     

HCWM

17 profiles found for the same TF (JUND) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000659.1 JUND ENCSR000BKP H1 Homo sapiens MA1141.2
BP000660.1 JUND ENCSR000BRF A549 Homo sapiens MA1141.2
BP000661.1 JUND ENCSR000BSA HCT116 Homo sapiens MA1141.2
BP000662.1 JUND ENCSR000BSK SK-N-SH Homo sapiens MA1141.2
BP000663.1 JUND ENCSR000BSU MCF-7 Homo sapiens MA1141.2
BP000664.1 JUND ENCSR000BVO T47D Homo sapiens MA1141.2
BP000665.1 JUND ENCSR000DJX K562 Homo sapiens MA1141.2
BP000666.1 JUND ENCSR000DYS GM12878 Homo sapiens MA1141.2
BP000667.1 JUND ENCSR000EBZ H1 Homo sapiens MA1141.2
BP000668.1 JUND ENCSR000EDH HeLa-S3 Homo sapiens MA1141.2
Showing 10 profiles of page 1 from 2 pages