Detailed information of deep learning profile BP000656.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP000656.1
Cell line/tissue: K562
Class: Fork head/winged helix factors
Family: FOX
JASPAR ID: MA0148.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR819LHG
Model: BPNet
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Contribution weight matrix (CWM)

A [ -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 -0.00 0.01 0.00 -0.00 -0.00 0.00 ]
C [ -0.00 0.00 0.00 0.00 0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.01 -0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.01 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 -0.00 0.01 0.01 0.01 -0.00 0.00 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

A [ 219 251 230 273 270 300 244 260 255 235 260 252 260 273 265 211 148 185 195 29 158 37 6 42 779 42 425 60 656 245 169 213 312 226 228 285 271 240 278 262 289 251 265 258 276 296 272 251 246 247 ]
C [ 258 229 227 207 239 205 211 188 240 235 254 238 220 226 216 183 366 285 223 9 10 15 13 15 6 812 121 474 22 100 284 227 205 232 220 235 224 245 236 230 216 232 227 231 246 227 199 227 229 233 ]
G [ 220 215 256 216 216 218 223 202 212 209 247 249 222 173 218 233 214 162 193 12 801 6 67 168 168 22 9 50 32 471 266 301 235 213 200 179 197 204 207 225 198 201 213 210 184 194 237 208 233 208 ]
T [ 277 279 261 278 249 251 296 324 267 295 213 235 272 302 275 347 246 342 363 924 5 916 888 749 21 98 419 390 264 158 255 233 222 303 326 275 282 285 253 257 271 290 269 275 268 257 266 288 266 286 ]

Hypothetical CWM

A [ -0.00 -0.00 -0.00 -0.00 -0.00 0.01 -0.00 -0.01 -0.00 0.01 -0.00 0.01 -0.01 0.01 -0.00 -0.00 -0.00 0.00 ]
C [ -0.00 0.00 -0.00 -0.00 -0.01 -0.01 -0.01 -0.01 -0.01 -0.01 0.01 -0.01 0.01 -0.01 -0.00 0.00 0.00 -0.00 ]
G [ -0.00 -0.00 -0.00 0.00 -0.01 0.01 -0.01 -0.00 -0.00 0.00 -0.01 -0.01 -0.01 -0.01 0.00 -0.00 0.00 -0.00 ]
T [ 0.00 0.00 0.00 0.00 0.01 -0.01 0.01 0.01 0.01 -0.01 -0.00 0.00 0.01 0.00 -0.00 -0.00 -0.00 -0.00 ]

12 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000655.1 FOXA1 ENCSR735KEY liver Homo sapiens MA0148.5
BP000657.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens MA0148.5
Showing 2 profiles of page 2 from 2 pages