Detailed information of deep learning profile BP000630.1

  1. Home
  2. Deep Learning Profile > BP000630.1
This page shows detailed deep learning-derived predictions and motifs for MYC in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: MYC
Model ID: BP000630.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
JASPAR ID: MA0147.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P61244  
Source: ENCSR784BVD
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 -0.00 -0.00 0.03 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.04 0.00 0.05 0.00 0.00 0.00 0.00 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 -0.00 0.04 0.01 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.00 -0.00 -0.00 0.00 0.02 -0.00 -0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1424 1395 1484 1386 1303 1448 1402 1375 1322 1335 1294 1367 1376 1320 1359 1383 1300 1646 2152 1262 42 7510 0 1 852 3 568 993 1249 1260 1215 1305 1418 1268 1241 1333 1325 1408 1314 1354 1320 1417 1382 1299 1391 1367 1329 1372 1366 1270 ]
C [ 2411 2368 2406 2430 2480 2508 2375 2441 2554 2503 2547 2542 2475 2634 2599 2340 2521 1884 2142 2546 7635 0 7672 0 1956 17 802 3794 2657 2476 2518 2507 2321 2651 2433 2417 2479 2429 2531 2597 2525 2431 2428 2487 2483 2357 2492 2458 2405 2503 ]
G [ 2416 2603 2463 2471 2537 2446 2576 2635 2404 2454 2501 2452 2517 2426 2391 2845 2615 3158 2224 3055 1 53 0 7677 7 7307 5527 1420 2149 2607 2517 2690 2647 2542 2702 2606 2528 2628 2510 2438 2434 2541 2456 2465 2391 2494 2476 2466 2465 2512 ]
T [ 1427 1312 1325 1391 1358 1276 1325 1227 1398 1386 1336 1317 1310 1298 1329 1110 1242 990 1160 815 0 115 6 0 4863 351 781 1471 1623 1335 1428 1176 1292 1217 1302 1322 1346 1213 1323 1289 1399 1289 1412 1427 1413 1460 1381 1382 1442 1393 ]

Hypothetical CWM

   
A [ -0.01 -0.01 -0.00 0.00 -0.00 -0.00 0.03 -0.04 0.01 -0.01 -0.03 -0.01 -0.01 -0.01 -0.01 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.01 0.04 -0.03 0.05 -0.03 0.02 -0.01 0.01 0.01 0.01 0.01 0.01 ]
G [ 0.01 0.01 0.01 0.01 0.01 -0.02 0.02 -0.03 0.05 -0.03 0.04 0.01 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.01 -0.01 -0.01 -0.01 -0.03 -0.01 0.01 -0.04 0.02 -0.00 -0.00 0.00 -0.00 -0.00 -0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4044

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 3152

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2348

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1166

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 680

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 421

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 120

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 106

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 95

CWM

PFM

     

HCWM

22 profiles found for the same TF (MYC) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000628.1 MYC ENCSR000FAZ K562 Homo sapiens MA0147.4
BP000629.1 MYC ENCSR744JJU K562 Homo sapiens MA0147.4
Showing 2 profiles of page 3 from 3 pages