JASPAR - CEBPB - BP000569.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000569.1
Cell line/tissue:	A549
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR701TCU
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 20514

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.04	0.08	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.07	-0.00	0.01	0.01	-0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.04	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	-0.00	0.09	0.08	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	5529	7018	5682	5657	5404	5509	5663	5573	6914	5632	5261	5297	6647	5221	5474	5923	6857	6569	4028	12504	20	0	2602	73	10167	4492	12812	20319	802	6283	4873	4366	6321	4914	5005	5411	5782	6622	5760	5386	5362	5323	5396	5581	5788	5744	6094	6868	5703	6682	]
C [	4078	3993	4053	4316	4324	4210	3916	5426	3938	4344	4095	4102	4035	4545	5598	4703	3491	3875	2706	2493	17	0	10	20323	2211	8172	7476	58	7316	5788	5091	6505	4367	5637	4489	5570	5319	3956	3966	5340	5398	4317	4136	4178	4167	4594	4039	4208	5470	4331	]
G [	5265	4164	5390	5168	4049	4113	5598	4116	4126	5075	3960	5463	4382	5759	4066	4402	5922	4592	6699	4957	9	199	14134	42	5246	233	89	66	2820	2454	5018	3143	4344	4264	4400	4117	3994	4187	5392	3999	4218	4031	5446	5189	5083	4123	4707	4086	3937	4053	]
T [	5642	5339	5389	5373	6737	6682	5337	5399	5536	5463	7198	5652	5450	4989	5376	5486	4244	5478	7081	560	20468	20315	3768	76	2890	7617	137	71	9576	5989	5532	6500	5482	5699	6620	5416	5419	5749	5396	5789	5536	6843	5536	5566	5476	6053	5674	5352	5404	5448	]

Hypothetical CWM

A [	0.00	0.00	0.00	-0.00	0.04	-0.04	-0.07	0.02	-0.01	0.01	0.01	0.06	0.08	-0.03	0.01	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.01	-0.00	-0.00	-0.04	-0.05	-0.08	0.08	-0.03	0.03	0.02	-0.04	0.03	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.02	-0.05	0.00	0.05	-0.03	0.06	-0.07	-0.05	-0.03	0.00	-0.00	0.01	0.00	0.01	]
T [	-0.00	-0.00	-0.00	0.01	-0.04	0.09	0.08	0.01	-0.01	-0.02	0.02	-0.06	-0.04	0.03	-0.00	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4165

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1521

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 287

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 181

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 100

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 59

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000564.1	CEBPB	ENCSR416QLJ	K562	Homo sapiens	MA0466.4
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4