JASPAR - CEBPB - BP000567.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000567.1
Cell line/tissue:	A549
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR606ZTC
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 19543

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.07	0.08	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	0.01	0.01	-0.00	0.07	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.07	0.04	0.00	0.00	-0.00	0.00	0.00	-0.00	0.02	-0.00	-0.00	0.00	]

Frequency matrix

A [	5140	5148	5206	5567	5697	5202	5371	5337	6420	5294	5569	5256	5592	5270	5272	6124	5615	5388	6210	5292	5501	9116	46	112	7183	3146	65	4392	19391	19527	561	6884	5203	4106	5160	5121	4768	5255	5325	6615	5251	5434	5204	5149	6206	6302	5242	5287	5272	5305	]
C [	3827	3792	3884	4298	4004	4747	4728	4989	3794	4111	3908	4970	4051	3886	3957	4234	4135	4156	3058	4625	2493	2786	63	80	188	4030	52	12183	152	2	4830	6160	4407	5356	4211	3916	5366	4259	4953	3868	4703	3837	3956	5073	4029	3979	4728	4914	3787	4875	]
G [	4227	5015	4094	3852	4284	4001	3981	3993	4119	4963	4796	3780	3761	4866	5097	4324	4993	4185	6058	4964	5438	6860	29	6982	7711	2375	19386	18	0	1	2501	2608	3805	3591	4371	5143	4361	3940	3929	3980	4148	3820	5041	3850	4051	4122	4042	3907	3979	4006	]
T [	6349	5588	6359	5826	5558	5593	5463	5224	5210	5175	5270	5537	6139	5521	5217	4861	4800	5814	4217	4662	6111	781	19405	12369	4461	9992	40	2950	0	13	11651	3891	6128	6490	5801	5363	5048	6089	5336	5080	5441	6452	5342	5471	5257	5140	5531	5435	6505	5357	]

Hypothetical CWM

A [	0.00	0.00	-0.00	-0.00	0.02	-0.04	-0.05	0.02	-0.02	-0.01	0.01	0.07	0.08	-0.04	0.01	-0.00	-0.01	-0.00	]
C [	0.01	0.00	0.01	-0.00	0.00	-0.03	-0.05	-0.06	0.05	-0.03	0.05	0.01	-0.04	0.02	0.01	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.02	-0.04	0.03	0.03	-0.02	0.07	-0.08	-0.05	-0.04	-0.00	-0.00	0.01	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.03	0.07	0.05	0.01	0.01	-0.01	0.02	-0.06	-0.04	0.03	-0.01	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 3872

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1209

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1131

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 321

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 228

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 30

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000564.1	CEBPB	ENCSR416QLJ	K562	Homo sapiens	MA0466.4
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4