JASPAR - CEBPB - BP000563.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000563.1
Cell line/tissue:	A549
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR375BUB
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 23449

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	0.02	0.00	-0.00	0.00	-0.00	0.00	0.00	0.04	0.08	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	0.08	-0.00	0.02	0.01	0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	0.00	0.04	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.09	0.08	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	8351	6391	6455	6064	6253	6216	6226	8249	6399	5904	6114	7959	5864	6075	6576	7831	7837	4543	14228	7	1	3577	62	11545	5108	14269	23279	813	7078	5412	4851	7480	5535	5539	6180	6384	7876	6290	5990	6076	6078	5982	6309	6453	6486	7016	8099	6434	7979	6856	]
C [	4469	4500	4660	4982	4544	4541	6654	4358	4781	4662	4525	4505	4780	6774	5684	3978	4154	2847	2898	4	0	14	23258	2612	9442	8983	35	8695	6336	5677	7761	4948	6718	5036	6743	6528	4430	4547	6520	6580	4861	4587	4634	4693	5355	4498	4849	6669	4850	4718	]
G [	4533	6536	6291	4504	4637	6701	4605	4631	6206	4528	6655	4945	7234	4604	5014	6986	5194	8282	5729	2	449	15027	60	5921	188	76	84	3066	2826	6133	3553	5016	4639	4963	4527	4377	4658	6681	4455	4581	4396	6672	6330	6212	4629	5548	4602	4411	4575	5899	]
T [	6096	6022	6043	7899	8015	5991	5964	6211	6063	8355	6155	6040	5571	5996	6175	4654	6264	7777	594	23436	22999	4831	69	3371	8711	121	51	10875	7209	6227	7284	6005	6557	7911	5999	6160	6485	5931	6484	6212	8114	6208	6176	6091	6979	6387	5899	5935	6045	5976	]

Hypothetical CWM

A [	0.00	0.00	0.00	-0.01	0.03	-0.05	-0.07	0.02	-0.02	0.01	0.02	0.06	0.08	-0.03	0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	-0.00	0.00	-0.04	-0.05	-0.09	0.08	-0.03	0.03	0.03	-0.05	0.03	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.02	0.03	-0.05	0.01	0.05	-0.03	0.07	-0.07	-0.05	-0.03	0.00	0.00	0.01	0.01	0.01	]
T [	-0.00	-0.01	-0.00	0.01	-0.04	0.09	0.08	0.02	-0.01	-0.03	0.03	-0.06	-0.05	0.03	-0.00	-0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5007

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1278

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1025

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 199

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 114

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 75

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 50

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 27

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4