JASPAR - CEBPB - BP000561.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000561.1
Cell line/tissue:	A549
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR269IUA
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 22749

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.01	-0.00	-0.00	0.00	0.07	0.07	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.01	-0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.00	0.01	0.01	-0.00	0.07	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.07	0.03	0.00	0.00	-0.00	0.00	-0.00	-0.00	0.02	-0.00	-0.00	0.00	]

Frequency matrix

A [	6081	6004	5957	6398	6788	6098	6148	6240	7474	6152	6524	6098	6485	6212	6066	7186	6537	6249	7262	6169	6528	10592	41	167	8544	3577	39	4938	22273	22725	693	7874	5998	4837	5884	5996	5600	6094	6178	7599	6125	6222	5974	6025	7327	7420	6057	6174	6099	6220	]
C [	4511	4414	4454	5131	4584	5572	5536	5730	4409	4662	4531	5885	4733	4524	4647	4986	4763	4770	3629	5421	2805	3208	111	103	245	4936	59	14170	474	7	5628	7313	5151	6290	4868	4555	6225	4862	5784	4481	5344	4438	4671	5926	4661	4535	5544	5693	4618	5700	]
G [	4843	5814	4832	4475	4951	4624	4641	4716	4797	5791	5648	4378	4386	5705	5998	4978	5875	4877	6973	5686	6288	8000	47	8033	8758	2666	22607	37	0	2	2892	2949	4378	4058	5217	6037	4986	4600	4628	4692	4879	4505	5859	4527	4687	4757	4659	4599	4605	4560	]
T [	7314	6517	7506	6745	6426	6455	6424	6063	6069	6144	6046	6388	7145	6308	6038	5599	5574	6853	4885	5473	7128	949	22550	14446	5202	11570	44	3604	2	15	13536	4613	7222	7564	6780	6161	5938	7193	6159	5977	6401	7584	6245	6271	6074	6037	6489	6283	7427	6269	]

Hypothetical CWM

A [	0.00	0.00	-0.00	-0.00	0.02	-0.04	-0.04	0.02	-0.02	-0.01	0.01	0.07	0.07	-0.03	0.01	-0.00	-0.00	-0.00	]
C [	0.01	0.00	0.01	0.00	0.00	-0.02	-0.04	-0.06	0.05	-0.02	0.04	0.01	-0.04	0.02	0.01	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.02	-0.04	0.03	0.03	-0.02	0.07	-0.07	-0.04	-0.03	0.00	-0.00	0.01	0.00	0.01	]
T [	-0.00	-0.00	-0.00	0.01	-0.02	0.07	0.05	0.01	0.01	-0.01	0.02	-0.05	-0.03	0.03	-0.00	0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4920

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 562

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 538

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 148

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 36

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4