JASPAR - CEBPB - BP000559.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000559.1
Cell line/tissue:	A549
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR190VMK
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 22951

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	0.02	0.00	0.00	0.00	-0.00	0.00	0.00	0.04	0.07	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.07	-0.00	0.01	0.01	0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03	-0.00	0.02	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	-0.00	0.08	0.07	0.00	-0.00	-0.00	0.01	-0.00	-0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	7827	6381	6413	6157	6239	6309	6244	7747	6354	6001	6133	7447	5899	6222	6713	7631	7302	4525	13862	16	1	3527	59	11375	5166	14649	22755	862	7118	5436	4914	7075	5604	5626	6189	6408	7380	6313	6061	6169	6075	6076	6409	6435	6496	6882	7695	6438	7482	6721	]
C [	4473	4506	4675	4862	4656	4479	6103	4422	4866	4607	4547	4615	4957	6264	5305	3981	4206	2937	2769	5	0	28	22744	2660	8934	8082	54	8129	6215	5759	7248	4898	6213	4929	6142	5932	4344	4456	5963	6000	4719	4638	4601	4666	5106	4453	4761	6068	4842	4785	]
G [	4614	5991	5741	4480	4589	6148	4549	4502	5599	4558	6093	4880	6565	4429	4907	6495	5191	7602	5645	5	235	14518	67	5515	167	86	89	3212	2917	5469	3458	4860	4561	4915	4513	4430	4690	6104	4453	4624	4445	6082	5747	5705	4558	5159	4533	4331	4539	5317	]
T [	6037	6073	6122	7452	7467	6015	6055	6280	6132	7785	6178	6009	5530	6036	6026	4844	6252	7887	675	22925	22715	4878	81	3401	8684	134	53	10748	6701	6287	7331	6118	6573	7481	6107	6181	6537	6078	6474	6158	7712	6155	6194	6145	6791	6457	5962	6114	6088	6128	]

Hypothetical CWM

A [	0.00	0.00	0.00	-0.00	0.03	-0.04	-0.06	0.02	-0.02	0.01	0.02	0.06	0.07	-0.03	0.01	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.01	-0.00	0.00	-0.03	-0.04	-0.08	0.07	-0.02	0.03	0.03	-0.04	0.02	0.01	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.02	-0.04	0.01	0.05	-0.03	0.06	-0.07	-0.04	-0.02	0.00	-0.00	0.01	0.00	0.01	]
T [	-0.00	-0.00	0.00	0.01	-0.04	0.08	0.08	0.01	-0.01	-0.02	0.03	-0.05	-0.04	0.03	-0.00	-0.00	0.00	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5173

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 1018

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 454

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 293

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 240

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4