JASPAR - CEBPB - BP000557.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000557.1
Cell line/tissue:	K562
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR000EHE
Model:	BPNet
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Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 26491

Contribution weight matrix (CWM)

A [	0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.02	-0.00	-0.00	0.00	0.15	0.16	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.03	-0.00	0.09	0.00	0.00	0.01	0.01	0.00	0.00	0.00	]
G [	0.01	0.00	0.01	0.01	-0.00	0.02	0.03	-0.00	0.15	-0.00	0.00	-0.00	-0.00	-0.00	0.00	-0.00	0.00	]
T [	-0.00	-0.00	0.00	-0.00	0.14	0.06	0.00	0.01	-0.00	0.00	0.00	-0.00	0.04	-0.00	-0.00	0.00	-0.00	]

Frequency matrix

A [	6167	6317	6369	6019	6911	8174	6230	6701	6987	10500	6532	7299	6185	7021	6307	6086	10325	7168	6299	8113	6818	9392	12893	46	37	10120	2602	23	2329	26255	26480	272	8917	7882	4975	7157	6919	5536	6116	6993	11167	6234	7003	6568	5869	10494	10126	6435	6227	6060	]
C [	7540	4856	4334	4800	7087	4627	8249	8528	8614	4402	4467	4166	9243	4592	4393	4591	5428	4650	5371	3541	8294	2573	2505	70	36	122	7048	69	21870	233	0	6153	10867	4916	8343	5535	4680	9970	5633	8980	5225	8909	4881	4572	9398	4828	4497	8150	8904	4624	]
G [	4953	5164	9065	4962	4577	6608	4775	4473	4585	5574	8750	8918	4584	4605	8728	9018	5049	9027	4734	10029	5686	6482	10680	18	12187	13224	2071	26373	1	3	9	2382	2771	4371	3731	7086	8891	4855	4417	4347	4313	4671	4339	8498	4595	4586	5626	5099	4310	4352	]
T [	7831	10154	6723	10710	7916	7082	7237	6789	6305	6015	6742	6108	6479	10273	7063	6796	5689	5646	10087	4808	5693	8044	413	26357	14231	3025	14770	26	2291	0	2	17684	3936	9322	9442	6713	6001	6130	10325	6171	5786	6677	10268	6853	6629	6583	6242	6807	7050	11455	]

Hypothetical CWM

A [	0.00	0.01	0.00	-0.01	0.06	-0.08	-0.09	0.05	-0.04	-0.00	0.02	0.15	0.16	-0.07	0.03	0.00	-0.01	-0.00	]
C [	0.01	0.00	0.01	-0.01	0.00	-0.03	-0.08	-0.11	0.13	-0.04	0.10	0.01	-0.08	0.05	0.03	0.02	0.02	0.01	]
G [	0.01	0.02	0.02	0.03	0.05	-0.08	0.05	0.05	-0.04	0.15	-0.15	-0.08	-0.05	0.00	-0.01	0.02	0.00	0.01	]
T [	-0.00	-0.01	0.00	0.02	-0.06	0.14	0.11	0.03	0.02	-0.04	0.04	-0.10	-0.08	0.07	-0.01	0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2375

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 936

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 595

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 246

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 245

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 219

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 145

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 132

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 63

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4