JASPAR - CEBPB - BP000556.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in IMR-90 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000556.1
Cell line/tissue:	IMR-90
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR000EFM
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 23440

Contribution weight matrix (CWM)

A [	0.00	0.00	-0.00	-0.00	0.03	-0.00	-0.00	0.02	-0.00	0.00	0.00	0.13	0.15	-0.00	0.01	-0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	-0.00	-0.00	-0.00	-0.00	0.02	-0.00	0.07	0.00	0.00	0.01	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.01	0.01	0.00	0.03	0.04	-0.00	0.15	0.00	0.00	0.00	-0.00	-0.00	0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.01	-0.00	0.13	0.06	0.00	0.01	0.00	0.00	0.00	0.00	0.04	-0.00	-0.00	0.00	0.00	]

Frequency matrix

A [	6744	6669	6401	7032	7042	6573	7027	7275	7951	6658	7439	6605	7320	6591	6487	7711	7416	7056	8470	6936	6040	13452	120	109	9250	2286	15	3805	23301	23407	261	10168	7572	5479	6623	7177	6439	6490	7249	8146	6832	7328	6747	6265	7846	8002	6771	6375	6609	6574	]
C [	4220	4154	4480	4834	4361	5132	5147	5296	4065	4280	3998	5776	4377	4002	4155	4908	4174	4717	3220	4929	2360	1978	102	67	209	3882	69	16257	127	11	5507	6983	4744	5803	4915	4230	6104	5014	5495	4618	5443	4207	4079	6105	4521	4239	5250	5601	4135	5646	]
G [	4814	5926	4473	4219	4835	4203	4256	4371	5051	5434	5495	4172	4033	5452	5580	4438	5575	4355	6576	5213	5971	7574	77	9242	10630	1802	23335	8	2	4	2150	2721	4011	3352	4455	5520	4277	4333	4103	4271	4466	4082	5474	4435	4178	4586	4252	4125	4119	4334	]
T [	7662	6691	8086	7355	7202	7532	7010	6498	6373	7068	6508	6887	7710	7395	7218	6383	6275	7312	5174	6362	9069	436	23141	14022	3351	15470	21	3370	10	18	15522	3568	7113	8806	7447	6513	6620	7603	6593	6405	6699	7823	7140	6635	6895	6613	7167	7339	8577	6886	]

Hypothetical CWM

A [	0.00	0.01	0.00	-0.01	0.06	-0.09	-0.09	0.05	-0.04	-0.00	0.02	0.13	0.15	-0.07	0.03	0.00	-0.01	-0.00	]
C [	0.01	0.01	0.01	-0.00	0.01	-0.03	-0.08	-0.11	0.13	-0.04	0.10	0.02	-0.08	0.05	0.03	0.02	0.02	0.01	]
G [	0.01	0.02	0.02	0.03	0.05	-0.07	0.06	0.06	-0.04	0.15	-0.15	-0.08	-0.04	0.01	-0.00	0.01	0.01	0.01	]
T [	-0.00	-0.01	0.00	0.02	-0.06	0.13	0.09	0.02	0.02	-0.03	0.04	-0.11	-0.09	0.06	-0.01	0.00	0.01	0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 4235

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 935

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 611

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 142

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 107

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 98

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 73

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 57

CWM

PFM

HCWM

Motif name: counts.neg_patterns.pattern_0

Num. of seqlets: 43

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4