JASPAR - CEBPB - BP000549.1

This page shows detailed deep learning-derived predictions and motifs for CEBPB in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name:	CEBPB
Model ID:	BP000549.1
Cell line/tissue:	Ishikawa
Class:	Basic leucine zipper factors (bZIP)
Family:	CEBP-related
JASPAR ID:	MA0466.4
Taxon:	Vertebrates
Species:	Homo sapiens
Data Type:	ChIP-seq
Uniprot ID:	P17676
Source:	ENCSR000BTT
Model:	BPNet
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Download TF-MoDISco Report

Sequence logo

Motif name: counts.pos_patterns.pattern_0

Number of seqlets: 17353

Contribution weight matrix (CWM)

A [	-0.00	0.00	-0.00	-0.00	0.02	0.00	0.00	0.00	-0.00	0.00	0.00	0.05	0.09	-0.00	0.00	-0.00	-0.00	]
C [	0.00	0.00	0.00	-0.00	-0.00	-0.00	0.00	0.00	0.08	-0.00	0.02	0.01	0.00	0.01	0.00	0.00	0.00	]
G [	0.00	0.00	0.00	0.00	0.01	-0.00	0.00	0.05	-0.00	0.03	-0.00	-0.00	-0.00	-0.00	-0.00	0.00	0.00	]
T [	-0.00	-0.00	-0.00	0.00	-0.00	0.10	0.09	0.00	-0.00	-0.00	0.01	-0.00	0.00	0.01	-0.00	-0.00	0.00	]

Frequency matrix

A [	6307	4422	4380	4222	4184	4349	4205	6159	4302	3954	4020	6068	3886	3963	4255	5637	5614	2996	10940	7	1	1598	18	7952	3255	10894	17303	377	4922	3781	3287	5778	3645	3703	4205	4390	5999	4175	3982	4088	3984	4111	4384	4440	4376	5080	6159	4453	6024	4776	]
C [	3323	3355	3755	3907	3530	3498	5519	3419	3566	3524	3573	3457	3595	5626	4576	2969	3155	2166	2018	6	1	2	17280	1433	7521	6404	8	7147	4953	4351	6482	3776	5330	3873	5647	5425	3399	3525	5489	5411	3735	3507	3363	3589	4532	3433	3679	5449	3532	3603	]
G [	3603	5512	5161	3472	3615	5491	3508	3571	5304	3596	5596	3731	6036	3662	3848	5528	4095	6710	4176	1	39	13780	15	6118	88	29	31	2118	1913	5195	2787	3601	3614	3748	3469	3364	3592	5529	3351	3519	3472	5449	5398	5161	3583	4486	3493	3309	3624	4962	]
T [	4120	4064	4057	5752	6024	4015	4121	4204	4181	6279	4164	4097	3836	4102	4674	3219	4489	5481	219	17339	17312	1973	40	1850	6489	26	11	7711	5565	4026	4797	4198	4764	6029	4032	4174	4363	4124	4531	4335	6162	4286	4208	4163	4862	4354	4022	4142	4173	4012	]

Hypothetical CWM

A [	0.00	0.00	-0.00	-0.00	0.04	-0.05	-0.07	0.02	-0.02	0.01	0.02	0.07	0.09	-0.04	0.01	0.00	-0.00	-0.00	]
C [	0.01	0.01	0.01	-0.00	0.00	-0.03	-0.04	-0.08	0.08	-0.02	0.03	0.03	-0.05	0.03	0.02	0.01	0.01	0.01	]
G [	0.01	0.01	0.01	0.01	0.03	-0.05	0.00	0.06	-0.02	0.07	-0.07	-0.05	-0.02	0.00	-0.00	0.01	0.01	0.01	]
T [	-0.00	-0.00	0.00	0.01	-0.04	0.10	0.09	0.02	-0.00	-0.02	0.03	-0.06	-0.06	0.03	0.00	-0.00	0.00	-0.00	]

Other motifs identified by TF-MoDISco

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 1052

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 495

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 256

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 205

CWM

PFM

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 111

CWM

PFM

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Model ID	Name	Data Source	Cell line/tissue	Species	JASPAR ID
BP000565.1	CEBPB	ENCSR447ZMS	A549	Homo sapiens	MA0466.4
BP000566.1	CEBPB	ENCSR474DCX	A549	Homo sapiens	MA0466.4
BP000567.1	CEBPB	ENCSR606ZTC	A549	Homo sapiens	MA0466.4
BP000568.1	CEBPB	ENCSR681NOM	GM12878	Homo sapiens	MA0466.4
BP000569.1	CEBPB	ENCSR701TCU	A549	Homo sapiens	MA0466.4
BP000570.1	CEBPB	ENCSR752AQK	A549	Homo sapiens	MA0466.4
BP000571.1	CEBPB	ENCSR853DWE	A549	Homo sapiens	MA0466.4