Detailed information of deep learning profile BP000548.1

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This page shows detailed deep learning-derived predictions and motifs for CEBPB in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: CEBPB
Model ID: BP000548.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: CEBP-related
JASPAR ID: MA0466.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P17676  
Source: ENCSR000BSR
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 -0.00 0.01 -0.00 0.00 0.01 -0.00 -0.00 0.00 0.10 0.11 -0.00 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.02 -0.00 0.06 0.00 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 -0.00 0.01 0.02 -0.00 0.10 -0.00 0.00 -0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 0.10 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 5727 5825 5894 5687 6198 7274 5952 5868 5981 8826 5951 6286 5942 6258 5919 5740 8719 6215 5998 6992 6074 7952 10759 37 83 8396 3036 153 3459 24238 24403 524 7674 6600 4591 6648 5902 5239 5771 5817 9125 5815 5954 5937 5788 9025 8439 5786 5702 5924 ]
C [ 6887 4954 4552 4936 6379 4931 7241 7497 7615 4621 4807 4663 7812 4834 4604 4673 5059 4993 4907 3673 7152 2614 3097 76 48 175 7173 51 18410 166 0 5795 9323 5351 7696 5048 4765 8542 5214 7812 4750 7629 4942 4746 7784 4792 4661 7324 7816 4736 ]
G [ 4794 4974 7639 5035 4582 5998 4822 4661 4704 5178 7790 7813 4670 4570 7636 7918 5208 7847 4911 9152 5788 6616 9922 35 9674 10775 2496 24140 2 0 1 2846 3075 4207 3925 6246 8038 4901 4637 4738 4786 4962 4583 7712 4746 4668 5435 4994 4585 4581 ]
T [ 6997 8652 6320 8747 7246 6202 6390 6379 6105 5780 5857 5643 5981 8743 6246 6074 5419 5350 8589 4588 5391 7223 627 24257 14600 5059 11700 61 2534 1 1 15240 4333 8247 8193 6463 5700 5723 8783 6038 5744 5999 8926 6010 6087 5920 5870 6301 6302 9164 ]

Hypothetical CWM

   
A [ 0.00 0.00 0.00 -0.00 0.04 -0.05 -0.07 0.03 -0.03 -0.01 0.02 0.11 0.11 -0.05 0.02 -0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 -0.00 0.00 -0.03 -0.06 -0.08 0.08 -0.03 0.07 0.01 -0.06 0.03 0.02 0.01 0.02 0.01 ]
G [ 0.01 0.02 0.02 0.02 0.04 -0.05 0.03 0.04 -0.03 0.10 -0.10 -0.06 -0.04 0.00 -0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 -0.00 0.01 -0.04 0.10 0.08 0.02 0.01 -0.02 0.02 -0.09 -0.06 0.04 -0.01 0.00 0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 2443

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2007

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1753

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 722

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 403

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 367

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 250

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 238

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 171

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 83

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 53

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_16

Num. of seqlets: 45

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_18

Num. of seqlets: 32

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_19

Num. of seqlets: 28

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_20

Num. of seqlets: 21

CWM

PFM

     

HCWM

27 profiles found for the same TF (CEBPB) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000544.1 CEBPB ENCSR000BQI HepG2 Homo sapiens MA0466.4
BP000545.1 CEBPB ENCSR000BRQ K562 Homo sapiens MA0466.4
BP000546.1 CEBPB ENCSR000BRX GM12878 Homo sapiens MA0466.4
BP000547.1 CEBPB ENCSR000BSD HCT116 Homo sapiens MA0466.4
BP000549.1 CEBPB ENCSR000BTT Ishikawa Homo sapiens MA0466.4
BP000550.1 CEBPB ENCSR000BUB A549 Homo sapiens MA0466.4
BP000551.1 CEBPB ENCSR000DYI A549 Homo sapiens MA0466.4
BP000552.1 CEBPB ENCSR000EBV H1 Homo sapiens MA0466.4
BP000553.1 CEBPB ENCSR000EDA HeLa-S3 Homo sapiens MA0466.4
BP000554.1 CEBPB ENCSR000EEE HepG2 Homo sapiens MA0466.4
Showing 10 profiles of page 1 from 3 pages