Detailed information of deep learning profile BP000522.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000522.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR996DUT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 -0.00 0.00 0.03 -0.00 -0.00 0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 -0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 460 433 450 409 467 489 491 470 540 463 479 449 461 470 504 552 508 371 454 712 2 13 1717 210 5 27 1839 44 373 449 395 350 463 477 440 457 520 499 481 440 470 486 461 488 485 448 490 442 459 500 ]
C [ 456 489 472 477 465 457 443 500 438 410 413 449 505 449 475 395 398 471 363 413 5 1 86 39 0 1811 0 605 669 552 518 513 418 454 453 463 462 413 415 442 434 460 471 476 426 438 475 458 441 440 ]
G [ 472 457 450 462 436 443 468 438 465 459 493 463 447 453 451 491 539 609 633 593 6 1735 7 1550 0 1 0 306 367 483 420 481 457 448 532 482 430 479 480 529 480 449 461 447 453 532 445 461 479 475 ]
T [ 452 461 468 492 472 451 438 432 397 508 455 479 427 468 410 402 395 389 390 122 1827 91 30 41 1835 1 1 885 431 356 507 496 502 461 415 438 428 449 464 429 456 445 447 429 476 422 430 479 461 425 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.01 -0.00 0.01 -0.02 -0.01 0.03 -0.01 -0.01 -0.00 0.03 -0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.01 -0.01 -0.03 -0.00 0.01 -0.02 0.03 -0.02 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.02 0.03 -0.03 0.01 -0.01 -0.02 -0.01 -0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.03 -0.00 -0.01 -0.01 0.03 -0.02 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 512

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 49

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages