Detailed information of deep learning profile BP000522.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000522.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR996DUT
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 0.03 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 -0.00 0.03 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.03 0.00 -0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 425 461 479 430 422 476 429 447 445 456 429 464 449 428 438 415 461 502 496 507 356 431 885 1 1 1835 41 30 91 1827 122 390 389 395 402 410 468 427 479 455 508 397 432 438 451 472 492 468 461 452 ]
C [ 475 479 461 445 532 453 447 461 449 480 529 480 479 430 482 532 448 457 481 420 483 367 306 0 1 0 1550 7 1735 6 593 633 609 539 491 451 453 447 463 493 459 465 438 468 443 436 462 450 457 472 ]
G [ 440 441 458 475 438 426 476 471 460 434 442 415 413 462 463 453 454 418 513 518 552 669 605 0 1811 0 39 86 1 5 413 363 471 398 395 475 449 505 449 413 410 438 500 443 457 465 477 472 489 456 ]
T [ 500 459 442 490 448 485 488 461 486 470 440 481 499 520 457 440 477 463 350 395 449 373 44 1839 27 5 210 1717 13 2 712 454 371 508 552 504 470 461 449 479 463 540 470 491 489 467 409 450 433 460 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.02 0.03 -0.01 -0.01 -0.00 0.03 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.01 -0.01 -0.02 -0.01 0.01 -0.03 0.03 -0.02 0.01 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.01 -0.02 0.03 -0.02 0.01 -0.00 -0.03 -0.01 -0.01 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.02 0.03 -0.00 -0.01 -0.01 0.03 -0.01 -0.02 0.01 -0.00 -0.01 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 512

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 113

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 49

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages