Detailed information of deep learning profile BP000520.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000520.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1130.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR991RJM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.02 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1982 2085 1936 2027 1966 2159 2111 2029 2054 1937 2025 1976 2076 2018 2234 1855 2063 1942 1927 2028 2192 2377 2031 1590 1892 2917 0 7 7488 913 2 408 7526 191 1656 1809 1747 1670 1719 2071 2007 1907 1954 2261 1989 1873 2002 2077 2040 2015 ]
C [ 1892 1668 1809 1812 1883 1730 1721 1750 1730 1811 1692 1753 1644 1785 1658 1553 1486 1843 1925 1722 1761 1551 1611 1817 1309 2049 8 0 6 87 0 7122 0 2494 2437 2026 2168 1875 1785 1780 1729 1676 1847 1766 1741 1682 1717 1706 1722 1717 ]
G [ 1600 1704 1734 1715 1731 1684 1764 1677 1826 1647 1793 1747 1747 1819 1750 1712 1818 1667 1614 1675 1744 1917 2157 2261 2496 2159 0 6681 0 6143 4 0 5 1264 1223 2028 1541 1861 1711 1735 1884 1902 1734 1621 1554 1906 1804 1758 1735 1751 ]
T [ 2057 2074 2052 1977 1951 1958 1935 2075 1921 2136 2021 2055 2064 1909 1889 2411 2164 2079 2065 2106 1834 1686 1732 1863 1834 406 7523 843 37 388 7525 1 0 3582 2215 1668 2075 2125 2316 1945 1911 2046 1996 1883 2247 2070 2008 1990 2034 2048 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 -0.00 0.01 -0.02 -0.01 0.02 -0.00 -0.01 0.01 0.02 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.02 0.00 0.01 -0.01 0.02 -0.01 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.01 0.02 -0.01 0.01 -0.01 -0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.02 0.01 -0.01 -0.01 0.02 -0.01 -0.02 0.01 0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5548

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2215

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2070

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1260

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 905

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 394

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 25

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages