Detailed information of deep learning profile BP000520.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000520.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1130.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR991RJM
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 -0.00 0.02 -0.00 -0.00 0.00 0.02 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.02 0.00 -0.00 -0.00 0.02 -0.00 0.00 0.00 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 2048 2034 1990 2008 2070 2247 1883 1996 2046 1911 1945 2316 2125 2075 1668 2215 3582 0 1 7525 388 37 843 7523 406 1834 1863 1732 1686 1834 2106 2065 2079 2164 2411 1889 1909 2064 2055 2021 2136 1921 2075 1935 1958 1951 1977 2052 2074 2057 ]
C [ 1751 1735 1758 1804 1906 1554 1621 1734 1902 1884 1735 1711 1861 1541 2028 1223 1264 5 0 4 6143 0 6681 0 2159 2496 2261 2157 1917 1744 1675 1614 1667 1818 1712 1750 1819 1747 1747 1793 1647 1826 1677 1764 1684 1731 1715 1734 1704 1600 ]
G [ 1717 1722 1706 1717 1682 1741 1766 1847 1676 1729 1780 1785 1875 2168 2026 2437 2494 0 7122 0 87 6 0 8 2049 1309 1817 1611 1551 1761 1722 1925 1843 1486 1553 1658 1785 1644 1753 1692 1811 1730 1750 1721 1730 1883 1812 1809 1668 1892 ]
T [ 2015 2040 2077 2002 1873 1989 2261 1954 1907 2007 2071 1719 1670 1747 1809 1656 191 7526 408 2 913 7488 7 0 2917 1892 1590 2031 2377 2192 2028 1927 1942 2063 1855 2234 2018 2076 1976 2025 1937 2054 2029 2111 2159 1966 2027 1936 2085 1982 ]

Hypothetical CWM

   
A [ -0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.02 -0.01 -0.01 0.01 0.02 -0.01 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 0.00 -0.02 -0.01 0.01 -0.01 0.02 -0.01 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.01 0.02 -0.01 0.01 0.00 -0.02 0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 -0.01 0.02 0.01 -0.01 -0.00 0.02 -0.01 -0.02 0.01 -0.00 -0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5548

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2215

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 2070

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 1260

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_6

Num. of seqlets: 905

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 394

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 298

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 25

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages