Detailed information of deep learning profile BP000508.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000508.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR504LBE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.01 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.03 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1108 1090 1099 1149 1129 1128 1089 1067 1149 1248 1028 1065 1120 1062 1079 1403 1239 1181 1034 1183 1987 0 0 4101 285 35 304 4104 268 954 1017 922 896 976 1101 1098 1134 1175 1341 1047 1058 1105 1143 1091 1210 1083 1135 1098 1117 1062 ]
C [ 987 937 973 952 930 932 944 964 993 856 883 961 973 965 917 865 937 846 1019 658 658 0 0 3 3424 0 3801 0 1097 1349 1178 1173 1056 921 916 937 896 1001 863 936 991 950 916 962 910 951 936 966 928 879 ]
G [ 894 916 940 914 924 925 949 942 866 909 939 949 862 935 949 943 1050 1076 1051 1357 1294 0 3929 0 6 18 0 4 984 734 929 854 817 905 901 1055 984 794 848 863 937 874 951 945 945 905 941 936 900 1021 ]
T [ 1119 1165 1096 1093 1125 1123 1126 1135 1100 1095 1258 1133 1153 1146 1163 897 882 1005 1004 910 169 4108 179 4 393 4055 3 0 1759 1071 984 1159 1339 1306 1190 1018 1094 1138 1056 1262 1122 1179 1098 1110 1043 1169 1096 1108 1163 1146 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.02 -0.01 -0.01 0.01 0.03 -0.01 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 0.00 -0.00 -0.02 -0.00 0.01 -0.02 0.02 -0.02 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 -0.02 0.02 -0.01 0.01 0.00 -0.02 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.02 -0.01 -0.02 0.01 0.00 -0.00 -0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4360

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2622

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 631

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 218

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 20

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages