Detailed information of deep learning profile BP000508.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000508.1
Cell line/tissue: A549
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR504LBE
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 0.00 0.00 0.00 0.00 0.02 -0.00 -0.00 0.00 0.03 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.01 0.00 0.00 0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 0.00 0.03 0.00 -0.00 -0.00 0.02 0.00 0.00 0.00 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 1146 1163 1108 1096 1169 1043 1110 1098 1179 1122 1262 1056 1138 1094 1018 1190 1306 1339 1159 984 1071 1759 0 3 4055 393 4 179 4108 169 910 1004 1005 882 897 1163 1146 1153 1133 1258 1095 1100 1135 1126 1123 1125 1093 1096 1165 1119 ]
C [ 1021 900 936 941 905 945 945 951 874 937 863 848 794 984 1055 901 905 817 854 929 734 984 4 0 18 6 0 3929 0 1294 1357 1051 1076 1050 943 949 935 862 949 939 909 866 942 949 925 924 914 940 916 894 ]
G [ 879 928 966 936 951 910 962 916 950 991 936 863 1001 896 937 916 921 1056 1173 1178 1349 1097 0 3801 0 3424 3 0 0 658 658 1019 846 937 865 917 965 973 961 883 856 993 964 944 932 930 952 973 937 987 ]
T [ 1062 1117 1098 1135 1083 1210 1091 1143 1105 1058 1047 1341 1175 1134 1098 1101 976 896 922 1017 954 268 4104 304 35 285 4101 0 0 1987 1183 1034 1181 1239 1403 1079 1062 1120 1065 1028 1248 1149 1067 1089 1128 1129 1149 1099 1090 1108 ]

Hypothetical CWM

   
A [ -0.00 -0.00 0.00 0.01 -0.02 -0.01 0.02 -0.01 -0.01 0.01 0.03 -0.01 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 -0.02 0.00 0.01 -0.01 0.02 -0.02 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 -0.02 0.02 -0.02 0.01 -0.00 -0.02 -0.00 0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.01 0.03 0.01 -0.01 -0.01 0.02 -0.01 -0.02 0.01 0.00 -0.00 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_0

Num. of seqlets: 4360

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2622

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1382

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 631

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 218

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 46

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 33

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 20

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages