Detailed information of deep learning profile BP000505.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000505.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR176EXN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 0.00 0.04 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.04 -0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.04 -0.00 0.02 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 0.04 -0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1193 1115 1161 1113 1216 1184 1181 1196 1134 1124 1122 1203 1145 1131 1368 1148 1210 1162 1087 1282 1257 1471 1229 1039 1200 2184 6 34 4289 356 4 106 4449 129 979 1120 1109 1018 1015 1282 1126 1162 1262 1236 1130 1156 1201 1286 1148 1156 ]
C [ 1087 1014 1101 1170 1078 1004 1064 1007 1035 985 1004 1077 960 1132 1019 953 889 960 1157 993 1057 953 897 867 814 838 26 5 64 23 0 4346 1 1632 1627 1199 1101 1012 1061 1101 1098 1118 1085 1028 1025 1048 1030 1046 1027 1147 ]
G [ 1032 1116 975 1069 1033 1102 1102 1079 1079 1118 1184 1028 1140 1107 992 1141 1240 999 1102 989 1055 1067 1279 1472 1492 1213 7 4095 14 3927 2 6 12 723 753 1157 977 1239 1138 994 1143 1068 1062 1067 1079 1086 1073 1020 997 1012 ]
T [ 1152 1219 1227 1112 1137 1174 1117 1182 1216 1237 1154 1156 1219 1094 1085 1222 1125 1343 1118 1200 1095 973 1059 1086 958 229 4425 330 97 158 4458 6 2 1980 1105 988 1277 1195 1250 1087 1097 1116 1055 1133 1230 1174 1160 1112 1292 1149 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 -0.00 0.01 -0.03 -0.02 0.04 -0.01 -0.02 0.01 0.04 -0.02 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.04 -0.01 0.02 -0.02 0.04 -0.03 0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.01 -0.03 0.04 -0.03 0.02 -0.02 -0.03 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.02 0.04 0.01 -0.02 -0.02 0.04 -0.03 -0.03 0.02 -0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 812

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 620

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 416

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 23

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000501.1 JUN ENCSR022WVP A549 Homo sapiens MA1130.2
BP000502.1 JUN ENCSR048CVK A549 Homo sapiens MA1130.2
BP000503.1 JUN ENCSR090RGB A549 Homo sapiens MA1130.2
BP000504.1 JUN ENCSR110UPH A549 Homo sapiens MA1130.2
BP000506.1 JUN ENCSR192PBJ A549 Homo sapiens MA1128.2
BP000507.1 JUN ENCSR489DIG A549 Homo sapiens MA1128.2
BP000508.1 JUN ENCSR504LBE A549 Homo sapiens MA1128.2
BP000509.1 JUN ENCSR604CKQ A549 Homo sapiens MA1128.2
BP000510.1 JUN ENCSR612GKD A549 Homo sapiens MA1130.2
BP000511.1 JUN ENCSR628MQN A549 Homo sapiens MA1130.2
Showing 10 profiles of page 2 from 4 pages