Detailed information of deep learning profile BP000505.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000505.1
Cell line/tissue: MCF-7
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1128.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR176EXN
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ -0.00 -0.00 -0.00 0.01 -0.00 -0.00 0.04 -0.00 -0.00 0.00 0.04 -0.00 -0.00 0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.02 -0.00 0.04 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 -0.00 0.04 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 0.00 -0.00 -0.00 0.04 0.00 -0.00 -0.00 0.04 0.00 -0.00 0.01 -0.00 -0.00 -0.00 ]

Frequency matrix

       
A [ 1149 1292 1112 1160 1174 1230 1133 1055 1116 1097 1087 1250 1195 1277 988 1105 1980 2 6 4458 158 97 330 4425 229 958 1086 1059 973 1095 1200 1118 1343 1125 1222 1085 1094 1219 1156 1154 1237 1216 1182 1117 1174 1137 1112 1227 1219 1152 ]
C [ 1012 997 1020 1073 1086 1079 1067 1062 1068 1143 994 1138 1239 977 1157 753 723 12 6 2 3927 14 4095 7 1213 1492 1472 1279 1067 1055 989 1102 999 1240 1141 992 1107 1140 1028 1184 1118 1079 1079 1102 1102 1033 1069 975 1116 1032 ]
G [ 1147 1027 1046 1030 1048 1025 1028 1085 1118 1098 1101 1061 1012 1101 1199 1627 1632 1 4346 0 23 64 5 26 838 814 867 897 953 1057 993 1157 960 889 953 1019 1132 960 1077 1004 985 1035 1007 1064 1004 1078 1170 1101 1014 1087 ]
T [ 1156 1148 1286 1201 1156 1130 1236 1262 1162 1126 1282 1015 1018 1109 1120 979 129 4449 106 4 356 4289 34 6 2184 1200 1039 1229 1471 1257 1282 1087 1162 1210 1148 1368 1131 1145 1203 1122 1124 1134 1196 1181 1184 1216 1113 1161 1115 1193 ]

Hypothetical CWM

   
A [ 0.00 -0.00 -0.01 -0.00 0.02 -0.03 -0.03 0.04 -0.02 -0.02 0.01 0.04 -0.02 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 0.00 -0.00 0.00 -0.03 -0.02 0.02 -0.03 0.04 -0.03 0.01 0.01 0.01 0.00 0.00 ]
G [ 0.00 0.00 0.01 0.01 0.01 -0.03 0.04 -0.02 0.02 -0.01 -0.04 0.00 -0.00 0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.02 0.04 0.01 -0.02 -0.01 0.04 -0.02 -0.03 0.01 -0.00 -0.01 -0.00 0.00 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 812

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 620

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 416

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 51

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 23

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000494.1 JUN ENCSR000EFA endothelial cell of umbilical vein Homo sapiens MA1130.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
Showing 10 profiles of page 1 from 4 pages