Detailed information of deep learning profile BP000494.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000494.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1130.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR000EFA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 0.00 -0.00 -0.00 0.02 -0.00 -0.00 0.10 -0.00 -0.00 0.00 0.08 -0.00 -0.00 -0.00 -0.00 ]
C [ 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 0.04 -0.00 0.07 0.00 0.00 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.01 0.01 0.00 0.09 0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 0.00 0.00 ]
T [ -0.00 -0.00 0.00 -0.00 -0.00 0.09 0.00 -0.00 -0.00 0.08 0.00 -0.00 0.02 0.00 -0.00 0.00 ]

Frequency matrix

       
A [ 4200 4308 4226 4464 4344 4439 4252 4369 4465 4574 4043 4393 4366 4238 3972 4801 5009 4834 3497 3945 8296 2 3 14754 127 367 2384 14512 798 3988 3894 3804 3595 3894 4350 4184 4304 4420 4791 3908 3777 4209 4073 4063 4374 4141 4286 4159 4185 4126 ]
C [ 3143 3078 3153 3067 3109 3008 3057 3201 3292 2963 3015 3155 3300 3127 2878 3026 3165 2887 3387 2170 1740 7 1 6 12688 46 12244 53 3589 4369 4293 3569 3040 3127 3500 3237 3039 3273 3166 3225 3367 3252 3260 3500 3134 3351 3120 3129 3069 3131 ]
G [ 3137 3105 3248 3097 3161 3175 3272 3162 3106 3285 3325 3286 3026 3370 3807 3273 2962 3321 3760 4970 4411 5 14559 0 593 178 72 123 2543 2564 3002 2755 2746 3162 2881 3367 3292 2787 2920 2912 3287 2880 3205 3087 3120 3100 3007 3160 3012 3346 ]
T [ 4300 4289 4153 4152 4166 4158 4199 4048 3917 3958 4397 3946 4088 4045 4123 3680 3644 3738 4136 3695 333 14766 217 20 1372 14189 80 92 7850 3859 3591 4652 5399 4597 4049 3992 4145 4300 3903 4735 4349 4439 4242 4130 4152 4188 4367 4332 4514 4177 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.00 0.00 0.04 -0.05 -0.05 0.10 -0.02 -0.02 0.03 0.08 -0.03 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.01 -0.05 -0.02 0.04 -0.05 0.08 -0.03 0.02 0.02 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.02 0.03 -0.04 0.09 -0.04 0.06 0.00 -0.04 -0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.04 0.09 0.03 -0.03 -0.01 0.08 -0.05 -0.05 0.04 0.00 -0.00 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5847

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2843

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1638

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 838

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 604

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 259

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 148

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 97

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 30

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 22

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000522.1 JUN ENCSR996DUT A549 Homo sapiens MA1128.2
Showing 1 profiles of page 4 from 4 pages