Detailed information of deep learning profile BP000494.1

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This page shows detailed deep learning-derived predictions and motifs for JUN in endothelial cell of umbilical vein using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: JUN
Model ID: BP000494.1
Cell line/tissue: endothelial cell of umbilical vein
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
JASPAR ID: MA1130.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P05412  
Source: ENCSR000EFA
Model: BPNet
Download trained model
Download TF-MoDISco Report

Sequence logo

 

Contribution weight matrix (CWM)

 
A [ 0.00 -0.00 0.00 0.02 -0.00 0.00 0.08 -0.00 -0.00 0.00 0.09 -0.00 -0.00 0.00 -0.00 -0.00 ]
C [ 0.00 0.00 -0.00 -0.00 0.00 -0.00 0.00 0.00 0.00 0.09 0.00 0.01 0.01 0.00 0.00 0.00 ]
G [ 0.00 0.00 0.00 0.00 0.00 0.07 -0.00 0.04 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00 ]
T [ -0.00 -0.00 -0.00 -0.00 0.08 0.00 -0.00 -0.00 0.10 -0.00 -0.00 0.02 -0.00 -0.00 0.00 0.00 ]

Frequency matrix

       
A [ 4177 4514 4332 4367 4188 4152 4130 4242 4439 4349 4735 3903 4300 4145 3992 4049 4597 5399 4652 3591 3859 7850 92 80 14189 1372 20 217 14766 333 3695 4136 3738 3644 3680 4123 4045 4088 3946 4397 3958 3917 4048 4199 4158 4166 4152 4153 4289 4300 ]
C [ 3346 3012 3160 3007 3100 3120 3087 3205 2880 3287 2912 2920 2787 3292 3367 2881 3162 2746 2755 3002 2564 2543 123 72 178 593 0 14559 5 4411 4970 3760 3321 2962 3273 3807 3370 3026 3286 3325 3285 3106 3162 3272 3175 3161 3097 3248 3105 3137 ]
G [ 3131 3069 3129 3120 3351 3134 3500 3260 3252 3367 3225 3166 3273 3039 3237 3500 3127 3040 3569 4293 4369 3589 53 12244 46 12688 6 1 7 1740 2170 3387 2887 3165 3026 2878 3127 3300 3155 3015 2963 3292 3201 3057 3008 3109 3067 3153 3078 3143 ]
T [ 4126 4185 4159 4286 4141 4374 4063 4073 4209 3777 3908 4791 4420 4304 4184 4350 3894 3595 3804 3894 3988 798 14512 2384 367 127 14754 3 2 8296 3945 3497 4834 5009 4801 3972 4238 4366 4393 4043 4574 4465 4369 4252 4439 4344 4464 4226 4308 4200 ]

Hypothetical CWM

   
A [ 0.01 0.00 -0.00 0.00 0.04 -0.05 -0.05 0.08 -0.01 -0.03 0.03 0.09 -0.04 0.00 0.00 -0.00 -0.00 ]
C [ 0.01 0.01 0.01 0.00 0.00 -0.01 -0.04 0.00 0.06 -0.04 0.09 -0.04 0.03 0.02 0.02 0.01 0.01 ]
G [ 0.01 0.01 0.02 0.02 0.02 -0.03 0.08 -0.05 0.04 -0.02 -0.05 -0.01 0.00 0.00 0.01 0.01 0.01 ]
T [ -0.00 -0.00 0.00 0.00 -0.03 0.08 0.03 -0.02 -0.02 0.10 -0.05 -0.05 0.04 0.00 -0.00 0.00 0.01 ]

Other motifs identified by TF-MoDISco

 

Motif name: counts.pos_patterns.pattern_1

Num. of seqlets: 5847

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_2

Num. of seqlets: 2843

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_3

Num. of seqlets: 1638

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_4

Num. of seqlets: 838

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_5

Num. of seqlets: 604

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_7

Num. of seqlets: 259

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_8

Num. of seqlets: 231

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_9

Num. of seqlets: 223

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_10

Num. of seqlets: 149

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_11

Num. of seqlets: 148

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_12

Num. of seqlets: 97

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_13

Num. of seqlets: 47

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_14

Num. of seqlets: 30

CWM

PFM

     

HCWM

Motif name: counts.pos_patterns.pattern_15

Num. of seqlets: 22

CWM

PFM

     

HCWM

31 profiles found for the same TF (JUN) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species JASPAR ID Sequence logo
BP000491.1 JUN ENCSR000ECA H1 Homo sapiens MA1128.2
BP000492.1 JUN ENCSR000EDG HeLa-S3 Homo sapiens MA1130.2
BP000493.1 JUN ENCSR000EEK HepG2 Homo sapiens MA0488.2
BP000495.1 JUN ENCSR000EFS K562 Homo sapiens MA1128.2
BP000496.1 JUN ENCSR000EGH K562 Homo sapiens MA1128.2
BP000497.1 JUN ENCSR000EZT K562 Homo sapiens MA1130.2
BP000498.1 JUN ENCSR000EZW K562 Homo sapiens MA1130.2
BP000499.1 JUN ENCSR000EZX K562 Homo sapiens MA1128.2
BP000500.1 JUN ENCSR000FAH K562 Homo sapiens MA1128.2
BP000501.1 JUN ENCSR022WVP A549 Homo sapiens MA1130.2
Showing 10 profiles of page 1 from 4 pages